BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07203 (UTR included)
(1795 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037A2H12 129 2e-29
BF14_335_C2 129 2e-29
BF14_335_C4 111 4e-24
BF01047B2H03 103 1e-21
BF01043B1E03 92 4e-18
BF01031B2E06 82 4e-15
>BF01037A2H12
Length = 773
Score = 129 bits (65), Expect = 2e-29
Identities = 99/109 (90%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 748 ttgtaaatttgtacgcggtagaagtaggagcgagaggtataatagccaaatctctctaca 807
|||| |||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 666 ttgtgaatttgtacgaggtaaaagtaggagcgagaggtataaaagccaaatctctcgaca 725
Query: 808 acctgctaaaagacttaggcctgccaagaactaacatcagttcaatctt 856
|||||||||||||||| | | |||||||| |||||||||||||| ||||
Sbjct: 726 acctgctaaaagactt-gccttgccaagagctaacatcagttcattctt 773
>BF14_335_C2
Length = 1827
Score = 129 bits (65), Expect = 2e-29
Identities = 133/155 (85%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 779 gagaggtataatagccaaatctctctacaacctgctaaaagacttaggcctgccaagaac 838
||||||||||| ||| ||||||||||||| ||| |||||| |||| |||||| | |||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 839 taacatcagttcaatcttggaacgtgcgtcgaaggcagccctagcaggttcgtttcatat 898
||||| ||||||| |||| |||||| | |||||| |||| |||| |||||||||||| ||
Sbjct: 1047 taacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaat 988
Query: 899 ttggttaggtagagagaggagcttggtcgatggag 933
|||||||| ||||||||||||||| || |||||
Sbjct: 987 ttggttag---gagagaggagcttggacggtggag 956
>BF14_335_C4
Length = 1491
Score = 111 bits (56), Expect = 4e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 853 tcttggaacgtgcgtcgaaggcagccctagcaggttcgtttcatatttggttaggtagag 912
|||||||||||| ||| ||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 1138 tcttggaacgtgagtctaaggcagccctagcaggatcgattcatatttggttaggtagag 1197
Query: 913 agaggagcttgg 924
||||||||||||
Sbjct: 1198 agaggagcttgg 1209
>BF01047B2H03
Length = 758
Score = 103 bits (52), Expect = 1e-21
Identities = 112/132 (84%)
Strand = Plus / Minus
Query: 504 atacgtgaagcggttagtctttcggtagcaaaagcgcaaaaagaaataaccacaaaccag 563
|||| ||||||||||||| ||| ||||| | ||| |||||||||||||||||||| |
Sbjct: 249 atacatgaagcggttagtattttggtagtcattgcggaaaaagaaataaccacaaacggg 190
Query: 564 cgatcaatagcttttgtgagagaaggcactagtgctacaaaatcaaacgtcaagccttac 623
|||| ||| | |||||||||||||| || ||| |||| ||| |||||| |||||||||||
Sbjct: 189 cgattaattggttttgtgagagaagacattagggctataaagtcaaacatcaagccttac 130
Query: 624 tctatcattaaa 635
|||||| |||||
Sbjct: 129 tctatccttaaa 118
>BF01043B1E03
Length = 830
Score = 91.7 bits (46), Expect = 4e-18
Identities = 108/128 (84%), Gaps = 3/128 (2%)
Strand = Plus / Plus
Query: 797 atctctctacaacctgctaaaagacttaggcctgccaagaactaacatcagttcaatctt 856
||||||||||||||| || ||| |||| ||||||| ||||||||||||| ||| ||||
Sbjct: 229 atctctctacaacctactgaaacacttgagcctgcccagaactaacatcaaatcattctt 288
Query: 857 ggaacgtgcgtcgaaggcagccctagcaggttcgtttcatatttggttaggtagagagag 916
||||||| | | ||||||| ||| ||||| |||||| ||||||||||||||||||||
Sbjct: 289 ggaacgtactgcaaaggcaggcct---aggtttgtttcaaatttggttaggtagagagag 345
Query: 917 gagcttgg 924
|| |||||
Sbjct: 346 gaccttgg 353
>BF01031B2E06
Length = 707
Score = 81.8 bits (41), Expect = 4e-15
Identities = 92/109 (84%)
Strand = Plus / Plus
Query: 738 aatatgttcgttgtaaatttgtacgcggtagaagtaggagcgagaggtataatagccaaa 797
|||| |||||| | ||||||||||||||||||||| |||||||| | | ||| ||| |||
Sbjct: 497 aataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgtaaaagctaaa 556
Query: 798 tctctctacaacctgctaaaagacttaggcctgccaagaactaacatca 846
|||||| ||||||| |||||| ||| |||||| | ||| |||||||||
Sbjct: 557 tctctccacaacctactaaaaaccttgggcctgtccagatctaacatca 605
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 232,526
Number of extensions: 4612
Number of successful extensions: 4612
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 4609
Number of HSP's successfully gapped: 6
Length of query: 1795
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1778
Effective length of database: 8,119,229
Effective search space: 14435989162
Effective search space used: 14435989162
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)