BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07204 (UTR included)
(2212 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B1E02 1197 0.0
>BF01023B1E02
Length = 624
Score = 1197 bits (604), Expect = 0.0
Identities = 619/624 (99%)
Strand = Plus / Plus
Query: 470 taccaacgcatatttaaatacaaatttaacaatgtctcaaggttccgaaaaacctttatc 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taccaacgcatatttaaatacaaatttaacaatgtctcaaggttccgaaaaacctttatc 60
Query: 530 gagccaggatgttgtggatcccactggacctactacacgaaaaggagtacttatatcttt 589
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61 gagccacgatgttgtggatcccactggacctactgcacgaaaaggagtacttatatcttt 120
Query: 590 ccgcactggaaagactatggaaattcctgagaaggatatcttgggaagatgtcgattcgt 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgcactggaaagactatggaaattcctgagaaggatatcttgggaagatgtcgattcgt 180
Query: 650 cggggagttcgaaaaattaaatcgaattggggaaggcacttacggtatagtctatagagc 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggggagttcgaaaaattaaatcgaattggggaaggcacttacggtatagtctatagagc 240
Query: 710 taaagataaattgaatggcaatattgttgccctgaaaaaagtgagaatggatgttgaaaa 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taaagataaattgaatggcaatattgttgccctgaaaaaagtgagaatggatgttgaaaa 300
Query: 770 ggatggtttacctttaagtggtcttagagaaattcaggtcctcatggcctgtcgccatga 829
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 301 ggatggtttacctttaagtggtcttagagaaattcaggtcctcatggcttgtcgccatga 360
Query: 830 gaacattgtgcagttgaaagaagttttagttggtcgctcacttgaaagcatattcctatc 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaacattgtgcagttgaaagaagttttagttggtcgctcacttgaaagcatattcctatc 420
Query: 890 aatggaatattgtgagcaggatctggcttcacttttggacaatatgacatctccatttac 949
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatggaatattgtgagcaggatctggcttcacttttggacaatatgacatctccatttac 480
Query: 950 tgaatcgcaggtcaaatgtcttatgctgcaagtattaaaaggcttaaagtacttgcactc 1009
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgaatcgcaggtcaaatgtcttatgctgcaagtattaaaaggcttaaagtacttgcactc 540
Query: 1010 caacttcattgtgcatagagatttaaaagtctccaatttattgttaactgacaaaggatg 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caacttcattgtgcatagagatttaaaagtctccaatttattgttaactgacaaaggatg 600
Query: 1070 tgttaaaatagctgatttcggttt 1093
||||||||||||||||||||||||
Sbjct: 601 tgttaaaatagctgatttcggttt 624
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 285,170
Number of extensions: 5365
Number of successful extensions: 5365
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5365
Number of HSP's successfully gapped: 1
Length of query: 2212
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2195
Effective length of database: 8,119,229
Effective search space: 17821707655
Effective search space used: 17821707655
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)