BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07225 (UTR included)
(1573 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B1D02 220 5e-57
BF01031B1E12 184 3e-46
BF01023A2A12 184 3e-46
BF01052B1H02 151 4e-36
BF01010B2F09 143 1e-33
BF01037B1H08 131 4e-30
BF01040A1G09 119 1e-26
BF01062A1A05 105 2e-22
>BF01056B1D02
Length = 778
Score = 220 bits (111), Expect = 5e-57
Identities = 151/163 (92%), Gaps = 6/163 (3%)
Strand = Plus / Plus
Query: 270 aaggaaaacatcgtgagggaacctggtcttataatttctaattataagattgaaatcgcc 329
||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 587 aaggaaaacgtcgtgaggaaacctggtcttataatttcaaattataagattgaaatcgcc 646
Query: 330 aagccgtcttgagcaagcgtggtgattaatgctctaaccttctccgtgtgagaagaggcc 389
|| ||||||||||||||||||||| |||||||||||||||| | ||||||||||||||
Sbjct: 647 aacccgtcttgagcaagcgtggtggttaatgctctaacctt---catgtgagaagaggcc 703
Query: 390 tt---tcagcagtgggctccgataggctgatgataatgatgat 429
|| ||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tttgctcagcagtgggctccgataggctgatgataatgatgat 746
>BF01031B1E12
Length = 730
Score = 184 bits (93), Expect = 3e-46
Identities = 139/152 (91%), Gaps = 3/152 (1%)
Strand = Plus / Plus
Query: 272 ggaaaacatcgtgagggaacctggtcttataattt-ctaattataagattgaaatcgcca 330
|||||||||||||||| ||||||||||||| ||| | || |||||||||||||||||||
Sbjct: 61 ggaaaacatcgtgaggaaacctggtcttatgattagcaaagtataagattgaaatcgcca 120
Query: 331 agccgtcttgagcaagcgtggtgattaatgctctaaccttctccgtgtgagaagaggcct 390
| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 121 acccgtcttgagcaagcgtggtgattaatgctctaaccttctccgtgtgagaaggggatt 180
Query: 391 t--tcagcagtgggctccgataggctgatgat 420
| ||||||||||||||||||||||| |||||
Sbjct: 181 tgctcagcagtgggctccgataggcttatgat 212
>BF01023A2A12
Length = 723
Score = 184 bits (93), Expect = 3e-46
Identities = 146/163 (89%), Gaps = 3/163 (1%)
Strand = Plus / Plus
Query: 270 aaggaaaacatcgtgagggaacctggtcttataatttctaattataagattgaaatcgcc 329
||||| ||| |||||||| ||||||||||||||||||| ||||||||| |||||||| ||
Sbjct: 186 aaggagaacgtcgtgaggaaacctggtcttataatttcaaattataagtttgaaatcacc 245
Query: 330 aagccgtcttgagcaagcgtggtgattaatgctctaaccttctccgtgtgagaagaggcc 389
|| | | ||||||| |||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 246 aatcagccttgagcgagcgtggtgattaatgctctaaccttctccatgtgataagaggcc 305
Query: 390 tt---tcagcagtgggctccgataggctgatgataatgatgat 429
|| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 306 tttgctcagcagtgagctccgataggctgatgatgatgatgat 348
>BF01052B1H02
Length = 790
Score = 151 bits (76), Expect = 4e-36
Identities = 144/166 (86%), Gaps = 3/166 (1%)
Strand = Plus / Minus
Query: 270 aaggaaaacatcgtgagggaacctggtcttataatttctaattataagattgaaatcgcc 329
|||||||||||||||||| |||||||||||||||||| ||| || || |||||||||||
Sbjct: 425 aaggaaaacatcgtgaggaaacctggtcttataatttgaaataattagtttgaaatcgcc 366
Query: 330 aagccgtcttgagcaagcgtggtgattaatgctctaaccttctccgtgtgagaagaggcc 389
|| ||||||||||||||||||||| ||||||||||||| |||||| || ||||| ||||
Sbjct: 365 aacccgtcttgagcaagcgtggtgcttaatgctctaactttctccatgggagaaaaggcg 306
Query: 390 tt---tcagcagtgggctccgataggctgatgataatgatgatgat 432
|| ||| |||||||||| ||| |||| ||||| ||||||||||
Sbjct: 305 tttgctcaacagtgggctctgatgggctaatgatggtgatgatgat 260
>BF01010B2F09
Length = 764
Score = 143 bits (72), Expect = 1e-33
Identities = 108/120 (90%)
Strand = Plus / Minus
Query: 309 aattataagattgaaatcgccaagccgtcttgagcaagcgtggtgattaatgctctaacc 368
|||||||| ||| |||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 379 aattataaaattaaaatcgccaatccgtcttgagcgagcgtggtgattaatgctctaacc 320
Query: 369 ttctccgtgtgagaagaggcctttcagcagtgggctccgataggctgatgataatgatga 428
|||||| |||||||||| |||| ||||| | ||||||||| |||||| |||| |||||||
Sbjct: 319 ttctccatgtgagaagacgcctctcagcggcgggctccgacaggctggtgatgatgatga 260
>BF01037B1H08
Length = 758
Score = 131 bits (66), Expect = 4e-30
Identities = 95/104 (91%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 318 attgaaatcgccaagccgtcttgagcaagcgtggtgattaatgctctaaccttctccgtg 377
||||||||||||| ||||||||||||||||||||| |||||||||||||||||| | ||
Sbjct: 238 attgaaatcgccaccccgtcttgagcaagcgtggtgcttaatgctctaaccttctacatg 297
Query: 378 tgagaagaggcctt---tcagcagtgggctccgataggctgatg 418
|||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 298 tgagaagaggcctttgctcagctgtgggctccgataggctgatg 341
>BF01040A1G09
Length = 753
Score = 119 bits (60), Expect = 1e-26
Identities = 113/130 (86%), Gaps = 3/130 (2%)
Strand = Plus / Plus
Query: 302 aatttctaattataagattgaaatcgccaagccgtcttgagcaagcgtggtgattaatgc 361
|||||| ||||||||| ||||||||||||| || |||||||||||||||| |||||||||
Sbjct: 10 aatttcaaattataagtttgaaatcgccaacccatcttgagcaagcgtggcgattaatgc 69
Query: 362 tctaaccttctccgtgtgagaagaggcct---ttcagcagtgggctccgataggctgatg 418
| |||||||||| || |||||||||| | |||||||||| |||||||||||||||
Sbjct: 70 ttaaaccttctccatgcgagaagaggcttatgctcagcagtggcttccgataggctgatg 129
Query: 419 ataatgatga 428
|| |||||||
Sbjct: 130 atgatgatga 139
>BF01062A1A05
Length = 777
Score = 105 bits (53), Expect = 2e-22
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 336 tcttgagcaagcgtggtgattaatgctctaaccttctccgtgtgagaagaggccttt 392
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 513 tcttgagcaagcgtggtgattaatgctctaaccttctccttgtgagaagaggccttt 569
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 183,884
Number of extensions: 3435
Number of successful extensions: 3435
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 3428
Number of HSP's successfully gapped: 8
Length of query: 1573
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1556
Effective length of database: 8,119,229
Effective search space: 12633520324
Effective search space used: 12633520324
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)