BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07236 (UTR included)
(2464 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2022_C1 2333 0.0
>BF14_2022_C1
Length = 2079
Score = 2333 bits (1177), Expect = 0.0
Identities = 1213/1225 (99%)
Strand = Plus / Plus
Query: 564 caggcacacggtctgaaatgtccacaaatatatcgtgctgagccggacaagatcaaactc 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 caggcacacggtctgaaatgtccacaaatatatcgtgctgagccggacaagatcaaactc 914
Query: 624 caacaactgcgcaagctttacacggacagaggcccgaccttcccctaccactgggacgtg 683
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 915 caacaactgcgcaaactttacacagacagaggcccgaccttcccctaccactgggacgtg 974
Query: 684 cccgtcgcgtgtgctatgctcaaaagttttataagcgaactaccagaatcaatcctcacc 743
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 975 cccgtcgcgtgtgctatgctcaaaacttttataagcgaacttccagaatcaatcctcacc 1034
Query: 744 caggagtttcacgggcagttagagcagaccacagctatgtctgaacctcaacgggaggcg 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 caggagtttcacgggcagttagagcagaccacagctatgtctgaacctcaacgggaggcg 1094
Query: 804 tcagttcgctcgatactggctagactgccggctgttaaccacagcctgctgggctggctc 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 tcagttcgctcgatactggctagactgccggctgttaaccacagcctgctgggctggctc 1154
Query: 864 gtcagacacctggaagaagtgctggccaatgaaacggtaaaccatgcgaatatgtcaact 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 gtcagacacctggaagaagtgctggccaatgaaacggtaaaccatgcgaatatgtcaact 1214
Query: 924 atcttgaccttcatgtgccccgccctcaacatgactcacaatcttctgagctacttcatc 983
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 atcttgagcttcatgtgccccgccctcaacatgactcacaatcttctgagctacttcatc 1274
Query: 984 actaaggcggacaagttattccccgacatacggctcacaaaatatgttcctccactcctc 1043
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1275 actaaggcggacaagttattccccgacatacggctcacaaaatatgttccgccactcctc 1334
Query: 1044 gcgattccttcggacttcccagaaaccgctccagaaataagcgaggagcttcgcaaacag 1103
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1335 gcgatcccttcggacttcccagaaaccgctccagaaataagcgaggagcttcgaaaacag 1394
Query: 1104 gaatctctactgaaccagatacatgctgagatgcacgccggatttattacgggagcgagg 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1395 gaatctctactgaaccagatacatgctgagatgcacgccggatttattacgggagcgagg 1454
Query: 1164 gaccaacaactgtgggaagcacaaaggattgttacccagctcaagaggaaacttcgtgct 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1455 gaccaacaactgtgggaagcacaaaggattgttacccagctcaagaggaaacttcgtgct 1514
Query: 1224 gtccagaaatctgtggagttgaatacagccccgatcagccaaccatccgtggaagaaaaa 1283
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1515 gtccagaaatctgtggagttgaatacagccccgatcaaccaaccatccgtggaagaaaaa 1574
Query: 1284 cctgaggaagaaaacgcgaggcggaactcctgcaacgaacaatccgaggacttggataaa 1343
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1575 cctgaggaagaaaacgcgaggcggaactcctgcaacgaacaatccgaggacttggaaaaa 1634
Query: 1344 cctcagctgacagacgcgttcctagagattaaagaatctccagcagatccgacgtttccg 1403
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1635 cctcagctgacagacgcgttcctagagattaaagaatcaccggcagatccgacgtttccg 1694
Query: 1404 gtcgaatttgaagataatttcgatttcaaaccgcctgaaactaatttcgaatttaaaccg 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1695 gtcgaatttgaagataatttcgatttcaaaccgcctgaaactaatttcgaatttaaaccg 1754
Query: 1464 gaagaggataaatttgacttcaaaacgcccgaaagcagtttcgattttaagacaccggat 1523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1755 gaagaggataaatttgacttcaaaacgcccgaaagcagtttcgattttaagacaccggat 1814
Query: 1524 gacaaattcaatttcgaaccggctgaagacgaatttgacttcaaacatgaacaggtcgag 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1815 gacaaattcaatttcgaaccggctgaagacgaatttgacttcaaacatgaacaggtcgag 1874
Query: 1584 gccgagccggattcggtggtcgaaaagccgaaattcacggaaaaggaattgcaagtactg 1643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1875 gccgagccggattcggtggtcgaaaagccgaaattcacggaaaaggaattgcaagtactg 1934
Query: 1644 agactacagttggaaaacgctgaataccaacaactaaaatcattactacaagccaaaatc 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1935 agactacagttggaaaacgctgaataccaacaactaaaatcattactacaagccaaaatc 1994
Query: 1704 aactccgagcagtttgaaatagttaaactgagaagccacgtcacgttaaagaataaacag 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1995 aactccgagcagtttgaaatagttaaactgagaagccacgtcacgttaaagaataaacag 2054
Query: 1764 gaagggaacacacagaacaataaag 1788
|||||||||||||||||||||||||
Sbjct: 2055 gaagggaacacacagaacaataaag 2079
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 330,937
Number of extensions: 6996
Number of successful extensions: 6996
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6994
Number of HSP's successfully gapped: 1
Length of query: 2464
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2447
Effective length of database: 8,119,229
Effective search space: 19867753363
Effective search space used: 19867753363
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)