BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07249 (UTR included)
(3262 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A2D05 1289 0.0
>BF01033A2D05
Length = 853
Score = 1289 bits (650), Expect = 0.0
Identities = 703/719 (97%), Gaps = 10/719 (1%)
Strand = Plus / Plus
Query: 2544 atgaatgttccactgcacaccatcgtcaagctgacttcatacggctacaaatacaacata 2603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgaatgttccactgcacaccatcgtcaagctgacttcatacggctacaaatacaacata 60
Query: 2604 gagatgataaagatgcccatcgactgtgtcgacacgcacagagttcagcccaaaaactgt 2663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagatgataaagatgcccatcgactgtgtcgacacgcacagagttcagcccaaaaactgt 120
Query: 2664 tcaatcaaccgcacgcccgacgaagctctggtgacggttccctctcactacgacaccctg 2723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaatcaaccgcacgcccgacgaagctctggtgacggttccctctcactacgacaccctg 180
Query: 2724 ccgtccaacctctggcagagctctgagacacagatgtagggctttggtgccggaccaagg 2783
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 181 ccgtccaacctctggcagagctctgagacacagatgtaggccttcggtcccggaccaagg 240
Query: 2784 tccgagctcactatccaggactgggggtcccagtcgaaggagctaagtacgtggttgtga 2843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccgagctcactatccaggactgggggtcccagtcgaaggagctaagtacgtggttgtga 300
Query: 2844 aaaaccgcggaagattgcggcagaactgatcgtcgaacgccatctagcgatcgaacagtg 2903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaaccgcggaagattgcggcagaactgatcgtcgaacgccatctagcgatcgaacagtg 360
Query: 2904 aactatgatgtgtttaatatggtacagactttataagactgagtggattcaaacagaatc 2963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aactatgatgtgtttaatatggtacagactttataagactgagtggattcaaacagaatc 420
Query: 2964 agatccagagatggcggcgaggggatgtgttcgcggtataataataagtagattaaaggc 3023
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 421 agatccagagatggcggcgaggagatgtgttcgcggtataataataagtagattaaaggc 480
Query: 3024 gatcgtcaatttgaatatccagtactgttataagttttctatataattatattttttata 3083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatcgtcaatttgaatatccagtactgttataagttttctatataattatattttttata 540
Query: 3084 aataacgtatcagtaatgtaatgttaaatgtgtcatttatattttttttttcattaaggt 3143
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 541 aataacgtatcagtaatgtaatgttaaatgtgtcatttata-tttttttttcattaaggt 599
Query: 3144 tacttttataggtgactagttacattgtaattgtaacgaggatacgtatatatttttttt 3203
||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 600 tacttttataggtgactagttac------attgtaacgaggatacgtata---ttttttt 650
Query: 3204 taaactaaatttaactagttttctaagttgacagccacaattttcatgaagtttctata 3262
| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ttaactaaatttatctagttttctaagttgacagccacaattttcatgaagtttctata 709
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 330,463
Number of extensions: 7055
Number of successful extensions: 7055
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7052
Number of HSP's successfully gapped: 2
Length of query: 3262
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3244
Effective length of database: 8,109,745
Effective search space: 26308012780
Effective search space used: 26308012780
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)