BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07254 (UTR included)
(1510 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A2E06 1158 0.0
>BF01020A2E06
Length = 635
Score = 1158 bits (584), Expect = 0.0
Identities = 624/637 (97%), Gaps = 2/637 (0%)
Strand = Plus / Plus
Query: 360 gaaaagagggtctagtatgaaattaatatacaatttgggtgccgtaaatagttttctcct 419
|||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 gaaaagagggtctagtttgaaattaatatgcaatttgggtgccgtaaatagttttctcct 60
Query: 420 tttttaataatttcacatagtaaagaatcattgaaatttttatgaaaaaagaacgacggt 479
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 61 tttttaataatttcacatagtaagga--cattgaaatttttatgaaaaaagaacgacggt 118
Query: 480 cttcaaaaacagataattacaatgttggaaataattaatggatttttgctcacatatttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 cttcaaaaacagataattacaatgttggaaataattaatggatttttgctcacatatttt 178
Query: 540 gtcacactttgtaccctcagcacactcattccagttttggttaagcctattgcggcatgt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gtcacactttgtaccctcagcacactcattccagttttggttaagcctattgcggcatgt 238
Query: 600 tttgttagaccgtcaaaagacgaaagacgtttactatcagaaatcgtcaaattaaaatcc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tttgttagaccgtcaaaagacgaaagacgtttactatcagaaatcgtcaaattaaaatcc 298
Query: 660 gatcaggtgaagatatcaatgaaagatgaatttgcagcttattccaagttacagcgtaaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gatcaggtgaagatatcaatgaaagatgaatttgcagcttattccaagttacagcgtaaa 358
Query: 720 ttaaacaagctcgaaacagaattaaaggacagttctcaagtacggttaagcagaagtttg 779
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 359 ttaaacaagcttgaaacagaattaaaggacagttctcaagtacgcttaagcagaagtttg 418
Query: 780 gctataaaaggttcaataaatatcttcttacaagtagtgatagcagttgtcattgtaata 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gctataaaaggttcaataaatatcttcttacaagtagtgatagcagttgtcattgtaata 478
Query: 840 tctgttatttggttcagacgcgagccgattgtggctcttagaggggacctgtttccgctt 899
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 479 tccgttatttggttcagacgcgagccgattgtggctcttagaggggatctgtttccgctt 538
Query: 900 agcactatattgagttatccaagtgatgtgccaaatgctatttctactcatgtctggttt 959
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 539 agcaatatattgagttatccaagtgatgtgccanntgctatttctactcatgtctggttt 598
Query: 960 gttatatcaaaggtttctgttggatcgttattaaaac 996
|||||||||||||||||| ||||||||||||||||||
Sbjct: 599 gttatatcaaaggtttctattggatcgttattaaaac 635
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 291,178
Number of extensions: 8343
Number of successful extensions: 8343
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8342
Number of HSP's successfully gapped: 1
Length of query: 1510
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1493
Effective length of database: 8,119,229
Effective search space: 12122008897
Effective search space used: 12122008897
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)