BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07256 (UTR included)
(1168 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A2B12 103 6e-22
BF01035X1C09 72 2e-12
BF01014A1H02 72 2e-12
BF14_729_C3 72 2e-12
BF01024A1H07 70 9e-12
BF01005B1E12 68 3e-11
BF01025A1D01 68 3e-11
>BF01054A2B12
Length = 849
Score = 103 bits (52), Expect = 6e-22
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 612 tccttcctcgtgggcttcagagtggggctgctcactacattcgctatactcg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tccttcctcgtgggcttcagagtggggctgctcactacattcgctatactcg 64
>BF01035X1C09
Length = 778
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 112 acgtctcggtaactttgcagcaaccgtgatcacgggcagacgagatga 159
|||| ||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 620 acgtttcggttactttgcagcaaccgtgatcacgggaagacgagatga 667
>BF01014A1H02
Length = 787
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 124 ctttgcagcaaccgtgatcacgggcagacgagatgacagcgtct 167
|||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 286 ctttacagcaaccgtgatcacgggcagacgagatgaaagcgtct 243
>BF14_729_C3
Length = 2041
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 112 acgtctcggtaactttgcagcaaccgtgatcacgggcagacgag 155
|||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 1632 acgtttcggttactttgcagcaaccgtgatcacgggcagacgag 1589
>BF01024A1H07
Length = 726
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 112 acgtctcggtaactttgcagcaaccgtgatcacgggcagacgagatg 158
|||| ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 691 acgtttcggttacttttcagcaaccgtgatcacgggcagacgagatg 645
>BF01005B1E12
Length = 657
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 117 tcggtaactttgcagcaaccgtgatcacgggcagacgagatg 158
||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 342 tcggttactttgcagcaaccgtgatcacggccagacgagatg 301
>BF01025A1D01
Length = 764
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 112 acgtctcggtaactttgcagcaaccgtgatcacgggcagacgagat 157
|||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 440 acgtttcggttacttttcagcaaccgtgatcacgggcagacgagat 485
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 153,125
Number of extensions: 3732
Number of successful extensions: 3732
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 3732
Number of HSP's successfully gapped: 7
Length of query: 1168
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1151
Effective length of database: 8,119,229
Effective search space: 9345232579
Effective search space used: 9345232579
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)