BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07298 (UTR included)
(1819 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B1D01 1072 0.0
>BF01019B1D01
Length = 569
Score = 1072 bits (541), Expect = 0.0
Identities = 562/569 (98%)
Strand = Plus / Plus
Query: 345 ccataaaatatatgccatccatatttctttaaaataaatacgttatttattgagatatca 404
||||||||||||||||| |||||||| |||||| |||||||||| ||||||||||||||
Sbjct: 1 ccataaaatatatgccaaccatatttttttaaaccaaatacgttagttattgagatatca 60
Query: 405 gttgtttctacgacatttaaaacacttaattttatgtactataaagtgttattttactca 464
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgtttctacgagatttaaaacacttaattttatgtactataaagtgttattttactca 120
Query: 465 tttatattaaatgtaataaaaacaacatcgcctacgatgtctgttcatatcaagtgtcgc 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttatattaaatgtaataaaaacaacatcgcctacgatgtctgttcatatcaagtgtcgc 180
Query: 525 agtcgattttaccctcgttctagtattgaaagattcattgtgccagataagaaagttccc 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtcgattttaccctcgttctagtattgaaagattcattgtgccagataagaaagttccc 240
Query: 585 tggtctgtggaatttaaagaatattgtccaaaaacttataatgcaccttcaattcatggc 644
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 241 tggtctgtggaatttaaagaatattgtccaaaaacttataatgctccttcaattcatggc 300
Query: 645 aaaccctgggcagatccagatattagaaatcctaatttcacaccaaaatggaatgatata 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaccctgggcagatccagatattagaaatcctaatttcacaccaaaatggaatgatata 360
Query: 705 gatggacaggtgaataggaaaagctacacaggaatttataaaatttctgatggaatgcca 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatggacaggtgaataggaaaagctacacaggaatttataaaatttctgatggaatgcca 420
Query: 765 ctgaacccttttggtaggactggtatatcaggaagaggagttttaggccgatggggacca 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctgaacccttttggtaggactggtatatcaggaagaggagttttaggccgatggggacca 480
Query: 825 aaccatgcagcagatccagttgttactagatggaaggattcaaatcattccatcctacaa 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaccatgcagcagatccagttgttactagatggaaggattcaaatcattccatcctacaa 540
Query: 885 tttgtggcaataaaacgtggggatacagg 913
|||||||||||||||||||||||||||||
Sbjct: 541 tttgtggcaataaaacgtggggatacagg 569
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 249,300
Number of extensions: 5126
Number of successful extensions: 5126
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5126
Number of HSP's successfully gapped: 1
Length of query: 1819
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1802
Effective length of database: 8,119,229
Effective search space: 14630850658
Effective search space used: 14630850658
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)