BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07317 (UTR included)
(1588 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061B2G12 716 0.0
>BF01061B2G12
Length = 754
Score = 716 bits (361), Expect = 0.0
Identities = 373/377 (98%)
Strand = Plus / Plus
Query: 515 agatgcgaccaacgagcacacggtgtcctcagcgtctctgtgtatgtctccggagtctgc 574
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 378 agatgcgaccaacgagcacacggtgtcgtcagcgtctctgtgtatgtctccggagtctgc 437
Query: 575 gggccccctgcaacccagtataacctcggcccccccacagaccccgctaccctcggcccc 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gggccccctgcaacccagtataacctcggcccccccacagaccccgctaccctcggcccc 497
Query: 635 cttacacgcgtcgactccacttcacacgaacggctacagggacaatgacgacgacaaaag 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cttacacgcgtcgactccacttcacacgaacggctacagggacaatgacgacgacaaaag 557
Query: 695 aaacagcgacaccgttaatggaaacatacacgtcaacgttgtatcggcgtcaactaacaa 754
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 558 aaacagcgacaccgttaatggaaatatacacgtcaacgttgtatcggcgtcaactaacaa 617
Query: 755 catggacgtcctgagcggcggcgagagtgacgccggggacactctatccagaagaaacaa 814
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 618 catggacgtcctgagcggcggcgagagtgacgccggggacactctgtccagaagaaacaa 677
Query: 815 caacagtatatcgtctggggttgtgacgtcagcggacacctgcaagaagcacggcgcgga 874
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 caacagtatatcgtctggagttgtgacgtcagcggacacctgcaagaagcacggcgcgga 737
Query: 875 cgtgacgtactacgtcg 891
|||||||||||||||||
Sbjct: 738 cgtgacgtactacgtcg 754
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,785
Number of extensions: 6801
Number of successful extensions: 6801
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6801
Number of HSP's successfully gapped: 1
Length of query: 1588
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1571
Effective length of database: 8,119,229
Effective search space: 12755308759
Effective search space used: 12755308759
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)