BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07333 (UTR included)
(2203 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028B2F03 1231 0.0
BF14_1010_C1 100 2e-20
>BF01028B2F03
Length = 661
Score = 1231 bits (621), Expect = 0.0
Identities = 651/661 (98%)
Strand = Plus / Plus
Query: 448 cgtgtttttgttgttgcatttatcggtgacaatttatatattgataaactatcatggccg 507
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtgtttttgttgttgcgtttctcggtgacaatttatatattgataaactatcatggccg 60
Query: 508 tggcattaaataaaggtatattcatagtggcagccaaaagaacgccgttcggtaaaatgg 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggcattaaataaaggtatattcatagtggcagccaaaagaacgccgttcggtaaaatgg 120
Query: 568 gcggcatgttgaaggacatgcgaccagcagacttgctggctggagtcgccaaagacgcct 627
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcggcgtgttgaaggacgtgcgaccagcagacttgctggctggagtcgccaaagacgcct 180
Query: 628 tcaaggccggcaatgtgtccccagcagcgatcgacacggtcaacatcggtatcgtcaacg 687
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 tcaaggccggcaatgtgtccccagcagcgatcgacacggtcaacatcggtatagtcaacg 240
Query: 688 tgctgtcggggagtcctgatggtggtctatcccctcgtcacgcggccctcaaggccggag 747
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 241 tgctgtcgggtagtcctgatggtggtctgtcccctcgtcacgcggccctcaaggccggag 300
Query: 748 tcccacaggagaaaccagctctgggtgttaaccgactgtgcggatcagggttccaggccg 807
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttccacaggagaaaccagctctgggtgttaaccgactgtgcggatcagggttccaggccg 360
Query: 808 ttataaacagcgctcaggacattatcacaggatcggctaatgtctccttagctggtggta 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttataaacagcgctcaggacattatcacaggatcggctaatgtctccttagctggtggta 420
Query: 868 cagaaaatatgtcttccgtaccgtttctggtacgaaacgtccgacacggagtccctttgg 927
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagaaaatatgtcctccgtaccgtttctggtacgaaacgtccgacacggagtccctttgg 480
Query: 928 gctcgaacatagaatttgaagatacattgttcagacaatcgttagacacctactgcaacc 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctcgaacatagaatttgaagatacattgttcagacaatcgttagacacctactgcaacc 540
Query: 988 acacgatgcctcagactgcagaaaacttagctgatcaatacaacttgaccaggacggaag 1047
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acacgatgcctcagactgcggaaaacttagctgatcaatacaacttgaccaggacggaag 600
Query: 1048 ttgatgaattttcatttcaatctcagcggaagtggaaagccgcacaggacagcggtgtgt 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgatgaattttcatttcaatctcagcggaagtggaaagccgcacaggacagcggtgtgt 660
Query: 1108 t 1108
|
Sbjct: 661 t 661
>BF14_1010_C1
Length = 1211
Score = 99.6 bits (50), Expect = 2e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 1455 gatctcgtggagataaacgaggcgttcgccgcccagactctgtcctgtgcgaaagctttg 1514
||||| || ||||| |||||||| |||| ||||||||||||||||||||||| ||| ||
Sbjct: 1002 gatctggtcgagatcaacgaggctttcgtggcccagactctgtcctgtgcgaaggctctg 1061
Query: 1515 aagctcgacatggagaagctgaacgtgaacggaggagccatcgctataggacacccgctg 1574
||| | ||| | || || || ||||||||||||||||||| ||| | ||||||||||||
Sbjct: 1062 aagttggacttagaaaaactcaacgtgaacggaggagccaccgccctcggacacccgctg 1121
Query: 1575 gcggcctccggggcgaggatcacggcacacctcg 1608
|| || ||||| | |||||||| || |||||||
Sbjct: 1122 gccgcgtccggctccaggatcaccgctcacctcg 1155
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,290
Number of extensions: 4603
Number of successful extensions: 4603
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4603
Number of HSP's successfully gapped: 2
Length of query: 2203
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2186
Effective length of database: 8,119,229
Effective search space: 17748634594
Effective search space used: 17748634594
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)