BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07354 (UTR included)
(2923 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B1H08 204 6e-52
BF01010B2F09 161 8e-39
BF01056B1D02 155 5e-37
BF01023A2A12 151 7e-36
BF01029B2F12 115 4e-25
BF01052B1H02 101 6e-21
>BF01037B1H08
Length = 758
Score = 204 bits (103), Expect = 6e-52
Identities = 127/135 (94%)
Strand = Plus / Plus
Query: 2752 agtcgtggtggcctggaggttaaaggcccgcctctcacacgtgagggcgcgggttcgaaa 2811
|||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 70 agtcgttgtggcctggaggttaaaggcccgcctctcatacgtgaaggcgcgggttcgaaa 129
Query: 2812 cctggcaactaccaatgtgatctgttccgagtcatatgtactttctaagagtatttagac 2871
|||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct: 130 cctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaagaatatttagtc 189
Query: 2872 accactgacagacgg 2886
||||||||| |||||
Sbjct: 190 accactgacggacgg 204
>BF01010B2F09
Length = 764
Score = 161 bits (81), Expect = 8e-39
Identities = 126/141 (89%)
Strand = Plus / Minus
Query: 2746 attaatagtcgtggtggcctggaggttaaaggcccgcctctcacacgtgagggcgcgggt 2805
||||| |||| | |||| |||||||||||||||| ||||||||||||||| | |||||||
Sbjct: 557 attaaaagtcttagtgggctggaggttaaaggccagcctctcacacgtgaagtcgcgggt 498
Query: 2806 tcgaaacctggcaactaccaatgtgatctgttccgagtcatatgtactttctaagagtat 2865
|||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 497 tcgaaacctgacaagtaccaatgtgatcttcatcgagtcatatgtactttctaagagtat 438
Query: 2866 ttagacaccactgacagacgg 2886
|||||| |||||||| |||||
Sbjct: 437 ttagacgccactgacggacgg 417
>BF01056B1D02
Length = 778
Score = 155 bits (78), Expect = 5e-37
Identities = 119/129 (92%), Gaps = 4/129 (3%)
Strand = Plus / Plus
Query: 2752 agtcgtggtggcctggaggttaaaggcccgcctctcacacgtgagggcgcgggttcgaaa 2811
|||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||
Sbjct: 458 agtcgtggtggcctggaggttaaagg-ccgcccat--cacgtgagggcgcgggtt-gaaa 513
Query: 2812 cctggcaactaccaatgtgatctgttccgagtcatatgtactttctaagagtatttagac 2871
|||||||| |||||||||||||| ||||||||||||||||||||||||| ||| ||||||
Sbjct: 514 cctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaagggtagttagac 573
Query: 2872 accactgac 2880
|||||||||
Sbjct: 574 accactgac 582
>BF01023A2A12
Length = 723
Score = 151 bits (76), Expect = 7e-36
Identities = 123/135 (91%), Gaps = 4/135 (2%)
Strand = Plus / Plus
Query: 2752 agtcgtggtggcctggaggttaaaggcccgcctctcacacgtgagggcgcgggttcgaaa 2811
||||||||||||||| |||||||||| ||||| | |||||||||||||||||| ||||
Sbjct: 53 agtcgtggtggcctgaaggttaaagg-ccgcccat--cacgtgagggcgcgggtt-gaaa 108
Query: 2812 cctggcaactaccaatgtgatctgttccgagtcatatgtactttctaagagtatttagac 2871
|||||||| |||||||||||||| |||||||||| ||||||||||||| |||||||||||
Sbjct: 109 cctggcaagtaccaatgtgatcttttccgagtcacatgtactttctaacagtatttagac 168
Query: 2872 accactgacagacgg 2886
||||||||| |||||
Sbjct: 169 accactgacggacgg 183
>BF01029B2F12
Length = 749
Score = 115 bits (58), Expect = 4e-25
Identities = 86/94 (91%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 2793 tgagggcgcgggttcgaaacctggcaactaccaatgtgatctgttccgagtcatatgtac 2852
||||||||||||||||||||||||||| |||||||||||| | | ||| |||||||||
Sbjct: 671 tgagggcgcgggttcgaaacctggcaagtaccaatgtgatttatga-gagacatatgtac 613
Query: 2853 tttctaagagtatttagacaccactgacagacgg 2886
|||||||||||||||||||||||||||| |||||
Sbjct: 612 tttctaagagtatttagacaccactgacggacgg 579
>BF01052B1H02
Length = 790
Score = 101 bits (51), Expect = 6e-21
Identities = 114/134 (85%), Gaps = 2/134 (1%)
Strand = Plus / Minus
Query: 2755 cgtggtggcctggaggttaaaggcccgcctctcacacgtgagggcgcgggttcgaaacct 2814
||||||||||| ||||||||||||||||||||| || |||||| || |||||||| |||
Sbjct: 561 cgtggtggcctagaggttaaaggcccgcctctcgtacatgagggtgcaggttcgaatcct 502
Query: 2815 ggcaactaccaatgtgatc--tgttccgagtcatatgtactttctaagagtatttagaca 2872
|| || ||| ||||||||| | || ||| | ||||| ||||| ||||||||||||||||
Sbjct: 501 gggaagtactaatgtgatctttttttcgaatgatatgcactttttaagagtatttagaca 442
Query: 2873 ccactgacagacgg 2886
| |||||| |||||
Sbjct: 441 ctactgacggacgg 428
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 297,885
Number of extensions: 6016
Number of successful extensions: 6016
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 6012
Number of HSP's successfully gapped: 7
Length of query: 2923
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2905
Effective length of database: 8,109,745
Effective search space: 23558809225
Effective search space used: 23558809225
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)