BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07375 (UTR included)
(1678 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032A2C08 1481 0.0
BF01047B1E01 127 6e-29
>BF01032A2C08
Length = 821
Score = 1481 bits (747), Expect = 0.0
Identities = 796/810 (98%), Gaps = 3/810 (0%)
Strand = Plus / Plus
Query: 328 ttacaaataacaaacttttcaaatgatgaaaagtttgtatttgt--gttaattagatatg 385
|||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 12 ttacaactaacaaacttttcaaatgatgaaaagtttgtatttatttgttaattagatatg 71
Query: 386 ctttttggttgttatttttttt-aagagtctatgttttcttttttctacttcgtatagat 444
||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 72 ctttttgtttgttattatttttgaagagtctatgttttcttttttctacttcgtatagat 131
Query: 445 taatttacgaatataaatatctgttatacagaatttaaaagttttttatttctacgatgg 504
||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 132 taatttacgaatataaatatctgttatccagaatttaaaagttttatatttttacgatgg 191
Query: 505 aagaagtatttaaagatccggtgccgttctcaaagggagtaagactacaggatctcatta 564
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 192 aagaagtatttaaagatccggtgccattctcaaagggagtaagactacaggatctcgtta 251
Query: 565 atggagagtcagagttccacatcgacctggattttaagaaaactcaaatgggtttgatgg 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atggagagtcagagttccacatcgacctggattttaagaaaactcaaatgggtttgatgg 311
Query: 625 gggcctgtgacgacgacttgttcccagatatggaggagaatgataacgacacagatgaca 684
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 312 gggcctgtgacgacgacttgttcccagatatggaggagaatgataacgatacagatgaca 371
Query: 685 tgaaactattggaggattctatggaggctgtggttctgtcgtgccccgaatatcacagct 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgaaactattggaggattctatggaggctgtggttctgtcgtgccccgaatatcacagct 431
Query: 745 tcgacgatttagcatctaaaatgattgactgtgtgcccagcggtgatgtaaagatgttga 804
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttgacgatttagcatctaaaatgattgactgtgtgcccagcggtgatgtaaagatgttga 491
Query: 805 ttattgaagaaggttctggatgtctcatacccccggatgcggttgtcacagtccactatg 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttattgaagaaggttctggatgtctcatacccccggatgcggttgtcacagtccactatg 551
Query: 865 ccgcatactttgaaaaggccagaatccccttcgactctacactcaccatgaacaatgggt 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ccgcatactttgaaaaggccagaatccccttcgactctacactcaccatgaacaatgggt 611
Query: 925 tgccattgaaaatgcagctagggaagggccgtttcatacccgggttagaaataggcctca 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tgccattgaaaatgcagctagggaagggccgtttcatacccgggttagaaataggcctca 671
Query: 985 catgtgtccacggaccgaaggcccattttcaattgatgctgtctcctcgggtggcgtggg 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 catgtgtccacggaccgaaggcccattttcaattgatgctgtctcctcgggtggcgtggg 731
Query: 1045 gcgagaggggagccctgcctcgtattaggcctgatcgagccctatttgttatccagctat 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gcgagaggggagccctgcctcgtattaggcctgatcgagccctatttgttatccagctat 791
Query: 1105 atgatgttacagacgtctcggccccagcaa 1134
||||||||||||||||||||||||||||||
Sbjct: 792 atgatgttacagacgtctcggccccagcaa 821
>BF01047B1E01
Length = 830
Score = 127 bits (64), Expect = 6e-29
Identities = 67/68 (98%)
Strand = Plus / Minus
Query: 1 ttaataatattaaacaattaagtgtgtagaaatattttatattttgtcttgacgtcaaaa 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 78 ttaataatattaaacaattaagtgtgtaaaaatattttatattttgtcttgacgtcaaaa 19
Query: 61 ctcaaaca 68
||||||||
Sbjct: 18 ctcaaaca 11
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 322,202
Number of extensions: 15724
Number of successful extensions: 15724
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 15722
Number of HSP's successfully gapped: 2
Length of query: 1678
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1661
Effective length of database: 8,119,229
Effective search space: 13486039369
Effective search space used: 13486039369
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)