BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07466 (UTR included)
(2062 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052B2G05 1241 0.0
BF14_1923_C1 133 1e-30
>BF01052B2G05
Length = 805
Score = 1241 bits (626), Expect = 0.0
Identities = 644/650 (99%)
Strand = Plus / Plus
Query: 589 acagcaatctggctttccggtttatgccagacacagatatggatgaaaagttaagaataa 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 acagcaatctggctttccggtttatgccagacacagatatggatgaaaagttaagaataa 215
Query: 649 atatagatatcaccattgcaatgccttgctccaatattggggctgatattttggactcta 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atatagatatcaccattgcaatgccttgctccaatattggggctgatattttggactcta 275
Query: 709 cttcacaaagtgtgtttggcttcggtgaattgcaggaagaagatacctggtgggaactta 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cttcacaaagtgtgtttggcttcggtgaattgcaggaagaagatacctggtgggaactta 335
Query: 769 caccagagcaaaagaatgcctttgaagcagtgaaatatatgaactcttatttgagagagg 828
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 caccagagcaaaagaacgcctttgaagcagtgaaatatatgaactcttatttgagagagg 395
Query: 829 aatatcattctgtgtggcaattactatggaaaaaaggtcatgggtctgtcagagctactg 888
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 396 aatatcattctgtgtggcaattactatggaaaaaaggccatgggtctgtcagagctactg 455
Query: 889 ttccccctcggaaaactaaacctaatcggcgaccagacgcctgtagactacatggagtgc 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttccccctcggaaaactaaacctaatcggcgaccagacgcctgtagactacatggagtgc 515
Query: 949 tcacattgaataaggttgctggaaacttccatataacagccggtaaaagtttacatttac 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tcacattgaataaggttgctggaaacttccatataacagccggtaaaagtttacatttac 575
Query: 1009 caagagggcacatacacttaaatatgctctttgatgacaccccacaaaattttagccaca 1068
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 576 caagagggcacatacacttaaatatgctctttgacgacaccccacaaaattttagccaca 635
Query: 1069 gaataaatagactgagttttggcagtcctgccaatggtattatatatccattggaaggag 1128
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 636 gaataaatagactgagtttcggcagtcccgccaatggtattatatatccattggaaggag 695
Query: 1129 atgagaaaattacttcagatgagagcatgttatatcagtattttctagaagttgtgccaa 1188
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 696 atgagaaaattacttcagatgagagcatgttatatcagtattttctagaagttgtgccga 755
Query: 1189 ctgatgtcgacactacattcgaatctatcaagaccttccagtactccgtc 1238
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ctgatgtcgacactacattcgaatctatcaagaccttccagtactccgtc 805
Score = 127 bits (64), Expect = 8e-29
Identities = 71/72 (98%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 517 gcaaaaagaaggtaatagacaaggtgaaagaattagatgctttttcaaaggttcctgatg 576
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 gcaaaaagaaggtaatagacaaggtgaaagaattagatgctttttc-aaggttcctgatg 59
Query: 577 aatacgtggaca 588
||||||||||||
Sbjct: 60 aatacgtggaca 71
>BF14_1923_C1
Length = 1366
Score = 133 bits (67), Expect = 1e-30
Identities = 67/67 (100%)
Strand = Plus / Minus
Query: 1 attgtgttcgctaaatgtagttaaaaatagaaaacttcgttattccaagaggacaatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 attgtgttcgctaaatgtagttaaaaatagaaaacttcgttattccaagaggacaatttt 20
Query: 61 cactcac 67
|||||||
Sbjct: 19 cactcac 13
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 344,385
Number of extensions: 8869
Number of successful extensions: 8869
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8868
Number of HSP's successfully gapped: 3
Length of query: 2062
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2045
Effective length of database: 8,119,229
Effective search space: 16603823305
Effective search space used: 16603823305
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)