BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07474 (UTR included)
(1958 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057B1F06 1582 0.0
BF01040A2D05 72 4e-12
>BF01057B1F06
Length = 837
Score = 1582 bits (798), Expect = 0.0
Identities = 829/838 (98%), Gaps = 1/838 (0%)
Strand = Plus / Plus
Query: 499 gtagccattcatgatgtcgctgtcgatgcgagagcaagggcttttagggctggaaagatt 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagccattcatgatgtcgctgtcgatgcgagagcaagggcttttagggctggaaagatt 60
Query: 559 ctaggaatcgatacaacatctgaaaaggagttgctagattatcttagaaaattagacgac 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctaggaatcgatacaacatctgaaaaggagttgctagattatcttagaaaattagacgac 120
Query: 619 aaacgtctcgtaaacttaactgtcgctactctaacacctgacgaaatgttgaggggaccg 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaacgtctcgtaaacttaactgtcgctactctaacacctgacgaaatgttgaggggaccg 180
Query: 679 ccagctcaattcgttccagttattgagaaaagaattcgcaatgttgaagcattcataagt 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccagctcaattcgttccagttattgagaaaagaattcgcaatgttgaagcattcataagt 240
Query: 739 gaacatccagtaaagatgttagtcgaaaataagataaacaaagtacctttaatgatcgga 798
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 241 gaacatccagtaaagatgttagtcgaaaataaaataaacaaagtacctttaatgatcgga 300
Query: 799 tataattccgcagaaggtttgattgctgtgaattttcaagcgactctgttggatatttac 858
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tata-ttccgcagaaggtttgattgctgtgaattttcaagcgactctgttggatatttac 359
Query: 859 aataaagaaccgtcttactatattcccaaagaggttgtagacagagtcactccagaacag 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aataaagaaccgtcttactatattcccaaagaggttgtagacagagtcactccagaacag 419
Query: 919 ttgcgtaacataggagataggataaaaaagttctacgttggaaatgggaattttacaata 978
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 420 ttgcgtaacataggagataggataaaaaagttctacgttggaaatgggaattttacaaca 479
Query: 979 gatgatttagatacaatctctgatttgattacagatttacatttctcgtatcctgatcac 1038
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 480 gatgatttagatacaatctctgctttgattacagatttacatttctcgtatcctgatcac 539
Query: 1039 agattcgttaatttatacgcatccttatacgaaacaatctatatgtacagatttaatttc 1098
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 540 agattcgttaatttatacgcatccttatacgaaccaatctatatgtacagatttaatttc 599
Query: 1099 gtaacgaagttaaacgtagtaaaaattgctctcggacatagcaaattaaaaggcgtatgt 1158
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gtaacgaagttaaacatagtaaaaattgctctcggacatagcaaattaaaaggcgtatgt 659
Query: 1159 cacgctgatgatctattttatttgttttataattacttaaacgaggaactgtataaaact 1218
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 660 cacgctgatgatctattttatttgttttataattacttaaacgaggaactttataaaact 719
Query: 1219 gatgagcaattacgagacatcgtgtttaaagttactaaattgtggacagatttcgctaaa 1278
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 720 gatgagcaattacgagacatcgtgtttaaagtgactaaattgtggacagatttcgctaaa 779
Query: 1279 acaggacgtccaacgccatctgactactttggagtaatttggaagccatatacaaagc 1336
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 780 acaggacgtccaacgccatctaactactttggagtaatttggaagccatatacaaagc 837
>BF01040A2D05
Length = 701
Score = 71.9 bits (36), Expect = 4e-12
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 196 ggatcgggcgatttctttttaggagacttccttttacagcatgaagttattttagtgaca 255
||||| || ||||||||||| |||||||||||| | |||||||| ||||| ||||| ||
Sbjct: 142 ggatcaggagatttctttttgggagacttccttatgcagcatgatgttatattagttact 201
Query: 256 ttcaattataggttggaattgctgggttttct 287
||||||||||| | ||||| || ||||||||
Sbjct: 202 ttcaattatagactcgaattactcggttttct 233
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 251,453
Number of extensions: 5192
Number of successful extensions: 5192
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5191
Number of HSP's successfully gapped: 2
Length of query: 1958
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1941
Effective length of database: 8,119,229
Effective search space: 15759423489
Effective search space used: 15759423489
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)