BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07478 (UTR included)
(2299 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046A2E11 1041 0.0
BF01033B2C10 204 5e-52
>BF01046A2E11
Length = 747
Score = 1041 bits (525), Expect = 0.0
Identities = 552/561 (98%)
Strand = Plus / Plus
Query: 431 tttgcgtaaagaattgtattgtgtcttatttccgggtgttgttaagaatgatgaaaaggc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 tttgcgtaaagaattgtattgtgtcttatttccgggtgttgttaagaatgatgaaaaggc 97
Query: 491 tatacagtgtatgggaggtataaaggctctttcacagcattacacccaagctaataaaaa 550
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 98 tatacagtgtatgggaggtataaaggctctttcacagcattacactcaagctaataaaaa 157
Query: 551 gcgactgggatttagctttcaaccagataatccttttatgaagaaaatatatgctgacgc 610
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 acgactgggatttagctttcaaccagataatccttttatgaagaaaatatatgctgacgc 217
Query: 611 aaaacccaccgccggtgtcctctttaaactaaaggttaagaaaactaaatcgggtaatga 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aaaacccaccgccggtgtcctctttaaactaaaggttaagaaaactaaatcgggtaatga 277
Query: 671 ggttaagaaagaagtaatttcaacatctattgttggaactgttaagaaaattaataggtt 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ggttaagaaagaagtaatttcaacatctattgttggaactgttaagaaaattaataggtt 337
Query: 731 tgaatcaatgtgtgacttccaatacttaccactcagtacaccacacatagaaggtgacaa 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgaatcaatgtgtgacttccaatacttaccactcagtacaccacacatagaaggtgacaa 397
Query: 791 accacaatgtcttatagaacaaatcataccctccggcctagatgagctgaattccatatt 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 accacaatgtcttatagaacaaatcataccctccggcctagatgagctgaattccatatt 457
Query: 851 ggaacccacgcctctctttataacaccatcaaattttacgaggtcagacaaaccgataac 910
||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 458 ggaacccacgcctctttttataacaccatcaaatattacgagatcagacaaaccgataac 517
Query: 911 atactgctacacagagaaacgctatgtgacaaaggatatgatgaagggcgagtccacaaa 970
||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 518 atactgctacacagaaaaacgctatgtgacaaaggatatgatgaagggtgagtcgactaa 577
Query: 971 tgacgaagtacataagacaag 991
|||||||||||||||||||||
Sbjct: 578 tgacgaagtacataagacaag 598
Score = 287 bits (145), Expect = 4e-77
Identities = 154/157 (98%)
Strand = Plus / Plus
Query: 1088 aagacaagctctgaatccatctttagaagaggaatacaatacagtggcaaagctcttcga 1147
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aagacaagctctgaatcaatctttagaagaggaatacaatacagtggcaaagctcttcga 650
Query: 1148 agagagaccgatatggtcattgaatctagtcaagtttcatacaaagataaagctgtcatc 1207
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 651 agagagaccgatatggtcgttgaacctagtcaagtttcatacaaagataaagctgtcatc 710
Query: 1208 tcttaaggtgataatgccgtgtcttgcattgtacatg 1244
|||||||||||||||||||||||||||||||||||||
Sbjct: 711 tcttaaggtgataatgccgtgtcttgcattgtacatg 747
>BF01033B2C10
Length = 678
Score = 204 bits (103), Expect = 5e-52
Identities = 109/111 (98%)
Strand = Plus / Minus
Query: 1 acctacagccagctagctcagatgcaagtcctcatgcattgataaataacttgaataaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 acctacagccagctagctcagatgcaagtcctcatgcattgataaataacttgaataaac 96
Query: 61 taaaactaagctaaatgtcttattttaataataaagaaatcgtgaaatttt 111
|||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 taaatttaagctaaatgtcttattttaataataaagaaatcgtgaaatttt 45
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 359,209
Number of extensions: 21282
Number of successful extensions: 21282
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 21282
Number of HSP's successfully gapped: 3
Length of query: 2299
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2282
Effective length of database: 8,119,229
Effective search space: 18528080578
Effective search space used: 18528080578
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)