BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07479 (UTR included)
(1405 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B2F06 321 2e-87
BF01051A2F06 103 7e-22
>BF01050B2F06
Length = 680
Score = 321 bits (162), Expect = 2e-87
Identities = 168/170 (98%)
Strand = Plus / Plus
Query: 563 gatcgctgaacgtgaactccgggagactcctgagcgtgttcgggaagctttggaaagact 622
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 gatcgctgaacgcgaactccgggagactcctgagcgtgttcgggaagcattggaaagact 60
Query: 623 gagagaactgttgaaagagaacaaagacatttatttcggagatgaagacgagatattgac 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagagaactgttgaaagagaacaaagacatttatttcggagatgaagacgagatattgac 120
Query: 683 aatatttctccgaccttgcaaatggtaccccgagagcgctctggctttga 732
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatatttctccgaccttgcaaatggtaccccgagagcgctctggctttga 170
>BF01051A2F06
Length = 822
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 783 agcgttcagcgttcattaggttataccgattctataacaacatcgcacacagagggcggt 842
||||||||||||||||||| |||||||| |||||||||||| |||||||||||||| ||
Sbjct: 822 agcgttcagcgttcattagaatataccgagtctataacaacaacgcacacagagggcagt 763
Query: 843 ctgaccgcggcg 854
||||||||||||
Sbjct: 762 ctgaccgcggcg 751
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 218,076
Number of extensions: 4677
Number of successful extensions: 4677
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4677
Number of HSP's successfully gapped: 2
Length of query: 1405
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1388
Effective length of database: 8,119,229
Effective search space: 11269489852
Effective search space used: 11269489852
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)