BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07480 (UTR included)
(1819 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B2F06 979 0.0
>BF01050B2F06
Length = 680
Score = 979 bits (494), Expect = 0.0
Identities = 506/511 (99%)
Strand = Plus / Plus
Query: 672 atgcgtcgggctgctgattttaagcgcgacaacgcgagcttgttggacggtttactgcca 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atgcgtcgggctgctgattttaagcgcgacaacgcgagcttgttggacggtttactgcca 229
Query: 732 gaacacgagaaggaggctttcctggagcacaaagtagtaaacgtcatgaagggtcgtgat 791
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 230 gaacacgagaaggaggctttcctggagcacaaagtagttaacgtcatgaagggtcgtgat 289
Query: 792 gataaaggaagaagagtgctcattgtcaacgttggaggtagctggaaccccaaaaaggtg 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gataaaggaagaagagtgctcattgtcaacgttggaggtagctggaaccccaaaaaggtg 349
Query: 852 acggcggatcaactgttcaggttattctatttaattcacgaagctgccatgttggaaccg 911
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 acggcagatcaactgttcaggttattctatttaattcacgaagctgccatgttggaaccg 409
Query: 912 gagtcccaagtccgaggaacagtcgtcattatggacttccacaaaatgggcatgagtcag 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gagtcccaagtccgaggaacagtcgtcattatggacttccacaaaatgggcatgagtcag 469
Query: 972 acgatgggtctaacgccggcgttttctaaacgtctgctcactttcatccaggacgcgttg 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 acgatgggtctaacgccggcgttttctaaacgtctgctcactttcatccaggacgcgttg 529
Query: 1032 cctcttagattgaaggaggtgcacttcgttaaagagcccatgatcttcaacatggtttgg 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cctcttagattgaaggaggtgcacttcgttaaagagcccatgatcttcaacatggtttgg 589
Query: 1092 aagctgttcaagcctttgatcagggaaaagttgaagggcaggatcttcttccacggcagc 1151
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aagctgttnnngcctttgatcagggaaaagttgaagggcaggatcttcttccacggcagc 649
Query: 1152 aacatgtcatctctacataagcatttggctc 1182
|||||||||||||||||||||||||||||||
Sbjct: 650 aacatgtcatctctacataagcatttggctc 680
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 326,511
Number of extensions: 39304
Number of successful extensions: 39304
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 39304
Number of HSP's successfully gapped: 1
Length of query: 1819
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1802
Effective length of database: 8,119,229
Effective search space: 14630850658
Effective search space used: 14630850658
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)