BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07484 (UTR included)
(2281 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037A2A02 478 e-134
>BF01037A2A02
Length = 790
Score = 478 bits (241), Expect = e-134
Identities = 241/241 (100%)
Strand = Plus / Plus
Query: 1 aatttacgtcacaatgttaatattattgactaaaactgaaataatggaaacaatggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 aatttacgtcacaatgttaatattattgactaaaactgaaataatggaaacaatggctat 197
Query: 61 tataaaccacttaaattttaattattattttgttattggaggattttttattagttacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tataaaccacttaaattttaattattattttgttattggaggattttttattagttacct 257
Query: 121 cgtttaccgcatgtttaattcctttttgggggataataatttcatacaaataaaatataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cgtttaccgcatgtttaattcctttttgggggataataatttcatacaaataaaatataa 317
Query: 181 gttacgaggacatacatggagaagtatcgattgtaataaatcaataccatataatattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gttacgaggacatacatggagaagtatcgattgtaataaatcaataccatataatattta 377
Query: 241 t 241
|
Sbjct: 378 t 378
Score = 361 bits (182), Expect = 3e-99
Identities = 185/186 (99%)
Strand = Plus / Plus
Query: 546 gttggttctgttactagagagaatcctgaccacatagaagagggggataatttaaaaaaa 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gttggttctgttactagagagaatcctgaccacatagaagagggggataatttaaaaaaa 664
Query: 606 ttcttctgttcctggtgccaaagagtaaggctcagtcaggaaaatgaattatcaaatacc 665
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 665 ttcttctgttcctggtgccaaagagtaaggctcagtcaggaaaatgagttatcaaatacc 724
Query: 666 gagagatgtgacttccaaaaatataaagatatcattattccaccgatgaatgtaaatatg 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gagagatgtgacttccaaaaatataaagatatcattattccaccgatgaatgtaaatatg 784
Query: 726 gataga 731
||||||
Sbjct: 785 gataga 790
Score = 307 bits (155), Expect = 4e-83
Identities = 161/163 (98%)
Strand = Plus / Plus
Query: 384 tgtacagtatgtgggaaactaatgttatcccttgtgggccttttctgtgaatgctgcggc 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgtacagtatgtgggaaactaatgttatcccttgtgggccttttctgtgaatgctgcggc 438
Query: 444 ataagtgcatgtaaaaaatgtcatcgtataattgataaaaagcaaagatgtaaacagatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ataagtgcatgtaaaaaatgtcatcgtataattgataaaaagcaaagatgtaaacagatg 498
Query: 504 tggtggccggcagagaaaccattctatcatctttgggttaatg 546
|||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 499 tggtggccggcagagaaaccgttctatcacctttgggttaatg 541
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 298,213
Number of extensions: 6796
Number of successful extensions: 6796
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6796
Number of HSP's successfully gapped: 3
Length of query: 2281
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2264
Effective length of database: 8,119,229
Effective search space: 18381934456
Effective search space used: 18381934456
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)