BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07500 (UTR included)
(1819 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A1G01 1463 0.0
>BF01051A1G01
Length = 857
Score = 1463 bits (738), Expect = 0.0
Identities = 811/833 (97%), Gaps = 8/833 (0%)
Strand = Plus / Plus
Query: 836 gctgttcgagctgttcaagaactcgatgagagctgtcatggaaacccacgagaacaaccc 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 gctgttcgagctgttcaagaactcgatgagagctgtcatggaaacccacgagaacaaccc 84
Query: 896 gcccccgatccaggtcaacatagtacagggacgggaggatatatcggtcaagatgtctga 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gcccccgatccaggtcaacatagtacagggacgggaggatatatcggtcaagatgtctga 144
Query: 956 tcgcgggggcggcataccccgcagcgtctccgacctcctcttcaagtatatgtacagcac 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tcgcgggggcggcataccccgcagcgtctccgacctcctcttcaagtatatgtacagcac 204
Query: 1016 agcgccgcaaccctcgcgctccgactcgcagaccgtacccctggctggttatggttacgg 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 agcgccgcaaccctcgcgctccgactcgcagaccgtacccctggctggttatggttacgg 264
Query: 1076 tctcccgatatcccgtctatacgcgcgctacttccacggcgacctggtgcttatgtcctg 1135
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 tctcccgatatcccgtctatacgcgcgctacttccacggcgacctggtgctgatgtcctg 324
Query: 1136 cgagggttacggaacagacgcgatcatataccttaaggctctaacgaacgaagcgaacga 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgagggttacggaacagacgcgatcatataccttaaggctctaacgaacgaagcgaacga 384
Query: 1196 gctgctgccgatcttcaaccggacttccagcaagttctataggacttcgccctcgcccgc 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctgctgccgatcttcaaccggacttccagcaagttctataggacttcgccctcgcccgc 444
Query: 1256 cgactggtccggcccggcgccctacaggcccaaagacaagccaaacttacaacacaaaca 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cgactggtccggcccggcgccctacaggcccaaagacaagccaaacttacaacacaaaca 504
Query: 1316 ataaagtatactttacagctatacgacctccatctcgtaaaaccttcgttatgatctcca 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ataaagtatactttacagctatacgacctccatctcgtaaaaccttcgttatgatctcca 564
Query: 1376 ctatatgacattaatgagttgttctgacaatgagagaacaatatattttgtatgaactga 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctatatgacattaatgagttgttctgacaatgagagaacaatatattttgtatgaactga 624
Query: 1436 taatatgtatgagtactaatgaatttgtcaagtgtgacaagcgcttaaaatgaatcgcct 1495
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 625 taatatgtatgagtactaatgaatttgttaagtgtgacaagcgcttaaaatgaatcgcct 684
Query: 1496 ccccttaaatacactgaag-aaacaaaatctgacacttgacagctgtcaaactggccgtc 1554
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 685 ccccttaaatacactgaagaaaacaaaatctgacacttgacagctgtcaaactggccgac 744
Query: 1555 attgtcggtgtcgaaaatgtatgccgtatgat-----gtcattggctgaatataatgtgc 1609
||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 745 attgtcggtgtcgaaaatgtatgccgtataattggcatacattggctgaatataatgtgc 804
Query: 1610 gtgttttgatcaaaacacatgtatttaattt--ttttttaacatttgcaactt 1660
||| ||||||||| || |||||||||| |||| |||||||||||||||
Sbjct: 805 acgttatgatcaaaagtaatttatttaattttcttttataacatttgcaactt 857
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 173,500
Number of extensions: 3217
Number of successful extensions: 3217
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3216
Number of HSP's successfully gapped: 1
Length of query: 1819
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1802
Effective length of database: 8,119,229
Effective search space: 14630850658
Effective search space used: 14630850658
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)