BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07533 (UTR included)
(3892 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B2C01 1461 0.0
BF01015A1C09 1294 0.0
>BF01016B2C01
Length = 737
Score = 1461 bits (737), Expect = 0.0
Identities = 737/737 (100%)
Strand = Plus / Plus
Query: 2594 tcacgatgaccacccaaaattagcatttttaaggtgtcatccagcacctagcaattattt 2653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcacgatgaccacccaaaattagcatttttaaggtgtcatccagcacctagcaattattt 60
Query: 2654 gttaaaacaacttgaaaaatccctaaaaccgttgggtatcgatattgatatttcatcagc 2713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttaaaacaacttgaaaaatccctaaaaccgttgggtatcgatattgatatttcatcagc 120
Query: 2714 gggcaatcttcatagatccctgacagattatttagatcaaaacagcttagataaagggaa 2773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gggcaatcttcatagatccctgacagattatttagatcaaaacagcttagataaagggaa 180
Query: 2774 agcaatggttcttagcatgttgtgcacgaaaccgatgacgagagcaaagtatttttgtgc 2833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcaatggttcttagcatgttgtgcacgaaaccgatgacgagagcaaagtatttttgtgc 240
Query: 2834 agcctcatgcgtggatgacgatttccatcactatgctcttaatgttccattgtatactca 2893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcctcatgcgtggatgacgatttccatcactatgctcttaatgttccattgtatactca 300
Query: 2894 cttcactagtccaatacggcgctacgcagatatcatggttcataggctgttatcagcaag 2953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttcactagtccaatacggcgctacgcagatatcatggttcataggctgttatcagcaag 360
Query: 2954 ccttaactacagcaaagttcctgcttgggaagttgataaggtcagaatggtggctgccaa 3013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccttaactacagcaaagttcctgcttgggaagttgataaggtcagaatggtggctgccaa 420
Query: 3014 ttgtaacaaacagaagtacaatgctaagagagccggtgaaatgtccactgagctttacac 3073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgtaacaaacagaagtacaatgctaagagagccggtgaaatgtccactgagctttacac 480
Query: 3074 tttgaagtacatagaaattaactcgccagttacagcagaagccgttgttgttgatgtcaa 3133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttgaagtacatagaaattaactcgccagttacagcagaagccgttgttgttgatgtcaa 540
Query: 3134 ggaaaaatatattgatgttataataacggcgatgggtttaaatcgacgcattttcttcaa 3193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggaaaaatatattgatgttataataacggcgatgggtttaaatcgacgcattttcttcaa 600
Query: 3194 taacgatttcccaggtgaattcctttgtgttaaaaacgatgcaggcgtaagactttccaa 3253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taacgatttcccaggtgaattcctttgtgttaaaaacgatgcaggcgtaagactttccaa 660
Query: 3254 aatggagttgacgtggaacgaaacagacactctgccttccgttaaacaagttattgaagt 3313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aatggagttgacgtggaacgaaacagacactctgccttccgttaaacaagttattgaagt 720
Query: 3314 attttccttactacaag 3330
|||||||||||||||||
Sbjct: 721 attttccttactacaag 737
>BF01015A1C09
Length = 665
Score = 1294 bits (653), Expect = 0.0
Identities = 662/665 (99%)
Strand = Plus / Plus
Query: 1941 ttatgcatttttagtatagatccgataaatacccgtgacatagatgatgctgtgtcatgc 2000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttatgcatttttagtatagatccgataaatacccgtgacatagatgatgctgtgtcatgc 60
Query: 2001 aggaaacttgccaatggaaactacgagataggtgttcatatatccgatgtttcttacttt 2060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggaaacttgccaatggaaactacgagataggtgttcatatatccgatgtttcttacttt 120
Query: 2061 ctgcatgaaggcactttattggatgaaaaagtctctgaaaaggcaacaactatttatatg 2120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 ctgcatgaaggcactttattggatgaaaaagtctctgaaaaggcgacaactatttatatg 180
Query: 2121 gttgaaagggcttatcacatgttaccggatgagctatgtatgttatgttccctgtttcca 2180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttgaaagggcttatcacatgttaccggatgagctatgtatgttatgttccctgtttcca 240
Query: 2181 ggcattgataaactcgctttttctgtgttttgggaaataactgatgatggtattgttttg 2240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcattgataaactcgctttttctgtgttttgggaaataactgatgatggtattgttttg 300
Query: 2241 aatcatagattttccaggactgttatccattcgtgttgtcaattagcatatgaccatgca 2300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatcatagattttccaggactgttatccattcgtgttgtcaattagcatatgaccatgca 360
Query: 2301 caagctgtgctggatgaaaaagaggatgcagagaagtcgtttcctgaaatttataatgga 2360
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 361 caagctgtgctggatgaaaaagaggatgcggagaagtcgtttcccgaaatttataatgga 420
Query: 2361 tttacttacaaagacatttctgaaactataaaggtacttggaaaaatatcagcaatattt 2420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttacttacaaagacatttctgaaactataaaggtacttggaaaaatatcagcaatattt 480
Query: 2421 agaaggagacgctttgataatggtgctttacgtatcgatcagcctaagattgcatttcat 2480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agaaggagacgctttgataatggtgctttacgtatcgatcagcctaagattgcatttcat 540
Query: 2481 ttaagtgcagcaaacgggctgcctgattcttattggatatacgaaagcagggaaagccat 2540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttaagtgcagcaaacgggctgcctgattcttattggatatacgaaagcagggaaagccat 600
Query: 2541 cagctgatagaagaatttatgttacttgctaatatgacagttgcaaagagaattcacgat 2600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cagctgatagaagaatttatgttacttgctaatatgacagttgcaaagagaattcacgat 660
Query: 2601 gacca 2605
|||||
Sbjct: 661 gacca 665
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 631,492
Number of extensions: 28282
Number of successful extensions: 28282
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 28280
Number of HSP's successfully gapped: 2
Length of query: 3892
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3874
Effective length of database: 8,109,745
Effective search space: 31417152130
Effective search space used: 31417152130
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)