BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07534 (UTR included)
(1942 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2273_C1 1566 0.0
>BF14_2273_C1
Length = 843
Score = 1566 bits (790), Expect = 0.0
Identities = 830/842 (98%), Gaps = 1/842 (0%)
Strand = Plus / Plus
Query: 404 cagtggtttgtttacttttttgtaaatattattctgatatttaagaacccttcaaatagt 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cagtggtttgtttacttttttgtaaatattattctgatatttaagaacccttcaaatagt 61
Query: 464 atctatattaattattaggcacgtgaaattgtatg-ccatggataaagaagtaaatattc 522
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 62 atctatattaattattaggcacgtgaaattatatggccatggataaagaagtaaatattc 121
Query: 523 atgacctcatgcacacagaagaagctaaaacaatatctggatttttcgccgttttagagg 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atgacctcatgcacacagaagaagctaaaacaatatctggatttttcgccgttttagagg 181
Query: 583 tattttttaatcagaagccgtgtcattcgttagagacaattaattcagattttattgata 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tattttttaatcagaagccgtgtcattcgttagagacaattaattcagattttattgata 241
Query: 643 aggatttaataaaagaaatcaaaagcttatcaaatactatacccatatattttggaaaaa 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggatttaataaaagaaatcaaaagcttatcaaatactatacccatatattttggaaaaa 301
Query: 703 ctgtaagagatatcaaatgcacgataagtgatgaacataatcttaggaaacacgatattt 762
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 302 ctgtaagagatatcaaatgcacgataagtgacgaacataatcttaggaaacacgatattc 361
Query: 763 atttgaaatataaaggtgttaagaagctagctgtggttgccgtgaatctacctcattctc 822
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 362 atttgaaatataaaggtgttaagaagctagctgtggttgccatgaatctacctcattctc 421
Query: 823 acttgcaagatagagaatattcttcgatcgaagaagtcgtttctgcttttcagaactatg 882
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 422 acttgcaagatagagaatattcgtcgatcgaagaagtcgtttctgcttttcagaactata 481
Query: 883 taaacagtttagctgaatatttccgtgagttagaaaatatagatctaatgtgtaatgtca 942
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 482 ttaacagtttagctgaatatttccgcgagttagaaaatatagatctaatgtgtaatgtca 541
Query: 943 gggagcctgttaagccaacattcaaagacgactataggagaattttagtggataataaaa 1002
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gggagcctgttaagccaaccttcaaagacgactataggagaattttagtggataataaaa 601
Query: 1003 catggctgcatatagaagtaagttttgatggcaggccaagaaacgtgcacatcattggaa 1062
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 catggcttcatatagaagtaagttttgatggcaggccaagaaacgtgcacatcattggaa 661
Query: 1063 actctgaaataggacaaaataaaactaaaaattttttgttaaattgggatcatgacaaga 1122
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 actctgaaataggacaagataaaactaaaaattttttgttaaattgggatcatgacaaga 721
Query: 1123 atattgttgaaaatatacattctttatttggagaactcactaagaatggtgataactggg 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atattgttgaaaatatacattctttatttggagaactcactaagaatggtgataactggg 781
Query: 1183 acacagaacttatagaagtaaaagaagatgaagaggtgacgtcctgttgtatatgttttt 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 acacagaacttatagaagtaaaagaagatgaagaggtgacgtcctgttgtatatgttttt 841
Query: 1243 gt 1244
||
Sbjct: 842 gt 843
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 349,914
Number of extensions: 9404
Number of successful extensions: 9404
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9403
Number of HSP's successfully gapped: 1
Length of query: 1942
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1925
Effective length of database: 8,119,229
Effective search space: 15629515825
Effective search space used: 15629515825
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)