BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07536 (UTR included)
(2425 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2679_C1 1394 0.0
>BF14_2679_C1
Length = 797
Score = 1394 bits (703), Expect = 0.0
Identities = 709/711 (99%)
Strand = Plus / Plus
Query: 485 gaatacggcggagcctatgcaagtggacgttccccttgaagataacgagaacaatgaaac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 gaatacggcggagcctatgcaagtggacgttccccttgaagataacgagaacaatgaaac 146
Query: 545 ggaatgctatgttgttgataaccctaccttggacttagagacttatgctgcgtcttacac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ggaatgctatgttgttgataaccctaccttggacttagagacttatgctgcgtcttacac 206
Query: 605 tggctttgctaaattgtacagattaatgtttgtagcagatcattgtccatcattgagatt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tggctttgctaaattgtacagattaatgtttgtagcagatcattgtccatcattgagatt 266
Query: 665 agaagctctaaaaatggctatatcctatgttatgaccacctataatgtaagtctttatca 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agaagctctaaaaatggctatatcctatgttatgaccacctataatgtaagtctttatca 326
Query: 725 aacacttcacaaaaaacttgctgaagctgtagcaactgtaggtctaccagatgttgcagt 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aacacttcacaaaaaacttgctgaagctgtagcaactgtaggtctaccagatgttgcagt 386
Query: 785 acagatgggttcacaggatattcctgtgcttgattctatgtgggtagaatctaaaaccaa 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 acagatgggttcacaggatattcctgtgcttgattctatgtgggtagaatctaaaaccaa 446
Query: 845 aaaggctgccatcaagttggaaaaattagatactgaccttaaaaattataaaactaattc 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaaggctgccatcaagttggaaaaattagatactgaccttaaaaattataaaactaattc 506
Query: 905 tattaaggagagcataagacggggccatgatgaccttggtgatcattacttggattgtgg 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tattaaggagagcataagacggggccatgatgaccttggtgatcattacttggattgtgg 566
Query: 965 cgatctcactagcgctctcaaatgttactctagagctagagattattgcacaagcggcaa 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cgatctcactagcgctctcaaatgttactctagagctagagattattgcacaagcggcaa 626
Query: 1025 acatataataatgatgtgcctcaatgtagttaaagtttcagtgtatttgcaaaactgggc 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 acatataataatgatgtgcctcaatgtagttaaagtttcagtgtatttgcaaaactgggc 686
Query: 1085 tcatgttttgaattatgtatcaaaggctgaaggaactccagattttaatgaagttcctgg 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tcatgttttgaattatgtatcaaaggctgaaggaactccagattttaatgaagttcctgg 746
Query: 1145 aaaggattccaaccaatccatactaacccgcttaaaatgtgccgccggttt 1195
||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 747 aaaggattcaaaccaatccatactaacccgcttaaaatgtgctgccggttt 797
Score = 159 bits (80), Expect = 3e-38
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 300 aggttggtttcctgcgttgacaagagaattcccgtattttcttttagagtcaagtttatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 aggttggtttcctgcgttgacaagagaattcccgtattttcttttagagtcaagtttatt 67
Query: 360 ataacgaaatgtttgaaatg 379
||||||||||||||||||||
Sbjct: 68 ataacgaaatgtttgaaatg 87
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 297,219
Number of extensions: 6299
Number of successful extensions: 6299
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6299
Number of HSP's successfully gapped: 2
Length of query: 2425
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2408
Effective length of database: 8,119,229
Effective search space: 19551103432
Effective search space used: 19551103432
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)