BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07538 (UTR included)
(4216 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043A1F05 1140 0.0
>BF01043A1F05
Length = 728
Score = 1140 bits (575), Expect = 0.0
Identities = 590/595 (99%)
Strand = Plus / Plus
Query: 175 gaacagtgatgtccaaaattattgagatagttgctggagttgatgaaaaaagcaacccat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 gaacagtgatgtccaaaattattgagatagttgctggagttgatgaaaaaagcaacccat 167
Query: 235 ccctcgataatgatttcgtaattaaaaatagtaaacgtgtacttaagcctagagaaaata 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ccctcgataatgatttcgtaattaaaaatagtaaacgtgtacttaagcctagagaaaata 227
Query: 295 ttttgaagcacaaatgcaataaagaattaaagaagaaacttaaaaagtacaaacttagaa 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ttttgaagcacaaatgcaataaagaattaaagaagaaacttaaaaagtacaaacttagaa 287
Query: 355 gaaataatcatgaagacccagatattttagatgtttcacaaaacttaattacttcattaa 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gaaataatcatgaagacccagatattttagatgtttcacaaaacttaattacttcattaa 347
Query: 415 aaattaaatctccaaacagtgacattaacacaaatagcaataaaaatttcagcgaaacgt 474
|||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||
Sbjct: 348 aaattaaatctccaaacagtgatattaacacaaatagcaataaaaatataagcgaaacgt 407
Query: 475 ataaacctaaaaattatttactaaaaatggtgagaactaaaaaaactaataaagaagcta 534
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 408 ataaacctaaaaattatttactaaaaatggtgagaactaaaaaaacgaataaagaagcta 467
Query: 535 agaaaaatcttaaagataaggaggaacacttactgaattcaattcagaaaggagatgtag 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 agaaaaatcttaaagataaggaggaacacttactgaattcaattcagaaaggagatgtag 527
Query: 595 aaatcctgccttttgaggatattgagaatgaaagtaaaaaacaaatgaatgctttcaaag 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 aaatcctgccttttgaggatattgagaatgaaagtaaaaaacaaatgaatgctttcaaag 587
Query: 655 tattgatggattctagaaacaaggtcattggtagtaactctccaggaaagagtaaaacac 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tattgatggattctagaaacaaggtcattggtagtaactctccaggaaagagtaaaacac 647
Query: 715 ccacaagcatagaactagacgaaataaccacacaaagagaaattaaggcaaaaag 769
||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 648 ccacaagcatagaactagatgaaataaccacacaaagagaaattaaggcaaaaag 702
Score = 119 bits (60), Expect = 4e-26
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 1 aattctaagattagagattttttatttaacggtggtcttaatcattgttgttttataatg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 aattctaagattagatattttttatttaacggtggtcttaatcattgttgttttataatg 104
Query: 61 cttg 64
||||
Sbjct: 105 cttg 108
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 651,330
Number of extensions: 13762
Number of successful extensions: 13762
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13762
Number of HSP's successfully gapped: 2
Length of query: 4216
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4198
Effective length of database: 8,109,745
Effective search space: 34044709510
Effective search space used: 34044709510
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)