BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07543 (UTR included)
(1732 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A2C06 230 6e-60
BF01016B1A11 212 1e-54
BF01056B1D01 182 1e-45
BF01014B2B09 153 1e-36
BF01055A2F06 113 1e-24
BF01055A2B03 98 6e-20
>BF01030A2C06
Length = 599
Score = 230 bits (116), Expect = 6e-60
Identities = 167/184 (90%)
Strand = Plus / Plus
Query: 1 ttccaccatatattattttgttatatctgaaagactttaggcagcgttttcgttagaagc 60
|||| |||||||||||||||||||| || |||||||| ||||||||||||| ||| |||
Sbjct: 305 ttccgccatatattattttgttatacctcaaagacttaaggcagcgttttctttaaaagg 364
Query: 61 tctcagacggctcatgttttcccgacatcttcaacaaatatcgtttatgtacacacaagt 120
|||| ||| |||||||||||| |||||| |||||||||||||||| ||||||||||||||
Sbjct: 365 tctcggactgctcatgttttctcgacattttcaacaaatatcgttaatgtacacacaagt 424
Query: 121 aaatacaaaaacctaacaaattatacactaaaaccttcctcaagaatcacgctaccgagt 180
|||||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 425 aaatacaaaaacttaacaaattatatactaaaaccttcctcgagaatcacgctttcgagt 484
Query: 181 ggtg 184
||||
Sbjct: 485 ggtg 488
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 190 tccgtatatcgcgaacagacagacagacagacgcggcgagggactttgttttataata 247
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 520 tccgtttatcgcgaacagacagacagacagacgccgcgagggactttgttttataata 577
>BF01016B1A11
Length = 786
Score = 212 bits (107), Expect = 1e-54
Identities = 160/177 (90%), Gaps = 3/177 (1%)
Strand = Plus / Plus
Query: 1 ttccaccatatattattttgttata---tctgaaagactttaggcagcgttttcgttaga 57
|||||| |||||||||||||||||| ||| |||| ||||||||||||||||||||| |
Sbjct: 328 ttccacgatatattattttgttatacaatctcaaaggctttaggcagcgttttcgttaaa 387
Query: 58 agctctcagacggctcatgttttcccgacatcttcaacaaatatcgtttatgtacacaca 117
||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 388 agctctcaggcggctcatgtttacccgacatcttcaacaaatatcgtgaatgtacacaca 447
Query: 118 agtaaatacaaaaacctaacaaattatacactaaaaccttcctcaagaatcacgcta 174
|||| |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 448 agtagatacaaaaactaaacaaattataaactaaaacctttctcgagaatcacgcta 504
>BF01056B1D01
Length = 838
Score = 182 bits (92), Expect = 1e-45
Identities = 165/192 (85%), Gaps = 8/192 (4%)
Strand = Plus / Plus
Query: 1 ttccaccatatattattttgttatatctgaaagactttaggcagcgttttcgttagaagc 60
|||| ||| |||||||||||||||| || |||||||| ||||||||||||| |||
Sbjct: 633 ttccgccaaatattattttgttatacctcaaagacttaaggcagcgttttctttannnnn 692
Query: 61 tctcagacggctcatgttttcccgacatcttcaacaaatatcgtttatg--------tac 112
|||||||| ||||||||||||||||||| |||||||||||||||| ||| |||
Sbjct: 693 tctcagactgctcatgttttcccgacattttcaacaaatatcgttaatgcgttaatgtac 752
Query: 113 acacaagtaaatacaaaaacctaacaaattatacactaaaaccttcctcaagaatcacgc 172
|||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||
Sbjct: 753 acacaagtaaatacaaaaacttaacaaattatatactaaaaccttcctcgagaatcacgc 812
Query: 173 taccgagtggtg 184
| |||||||||
Sbjct: 813 tttcgagtggtg 824
>BF01014B2B09
Length = 794
Score = 153 bits (77), Expect = 1e-36
Identities = 161/189 (85%)
Strand = Plus / Minus
Query: 1 ttccaccatatattattttgttatatctgaaagactttaggcagcgttttcgttagaagc 60
||||||| || |||||||||||| || | |||| ||| |||||||||||||||| ||||
Sbjct: 491 ttccaccttacattattttgttacatttaaaaggattttggcagcgttttcgttaaaagc 432
Query: 61 tctcagacggctcatgttttcccgacatcttcaacaaatatcgtttatgtacacacaagt 120
| |||||||||||| | ||| |||||||||||||||| |||||| |||||| ||||| |
Sbjct: 431 tgacagacggctcatttcttctcgacatcttcaacaaacatcgttaatgtacgcacaaat 372
Query: 121 aaatacaaaaacctaacaaattatacactaaaaccttcctcaagaatcacgctaccgagt 180
||||||||| |||||||||||| | ||||||||| |||||||||||||||| ||| |
Sbjct: 371 caatacaaaactttaacaaattatatattaaaacctttctcaagaatcacgctatcgact 312
Query: 181 ggtgaaaac 189
| |||||||
Sbjct: 311 gatgaaaac 303
>BF01055A2F06
Length = 787
Score = 113 bits (57), Expect = 1e-24
Identities = 75/81 (92%)
Strand = Plus / Minus
Query: 110 tacacacaagtaaatacaaaaacctaacaaattatacactaaaaccttcctcaagaatca 169
||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||
Sbjct: 763 tacacacaagtaaatacaaaaacttaataaattatacactaaaaccttcctcgagaatca 704
Query: 170 cgctaccgagtggtgaaaact 190
||||| |||| ||||| ||||
Sbjct: 703 cgctatcgagcggtgataact 683
Score = 73.8 bits (37), Expect = 8e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 196 tatcgcgaacagacagacagacagacgcggcgagggactttgttttataatat 248
|||| ||| |||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 651 tatctcgatcagacagacagacagaagcagcgagggactttgttttataatat 599
>BF01055A2B03
Length = 776
Score = 97.6 bits (49), Expect = 6e-20
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 110 tacacacaagtaaatacaaaaacctaacaaattatacactaaaaccttcctcaagaatca 169
||||||||||| ||||||||||| ||||||||| || ||||||||||||||| || ||||
Sbjct: 479 tacacacaagtcaatacaaaaacttaacaaattgtatactaaaaccttcctcgaggatca 538
Query: 170 cgctaccgagtggtgaaaact 190
||||| |||||||||| ||||
Sbjct: 539 cgctatcgagtggtgataact 559
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 227,571
Number of extensions: 5324
Number of successful extensions: 5324
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 5318
Number of HSP's successfully gapped: 9
Length of query: 1732
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1715
Effective length of database: 8,119,229
Effective search space: 13924477735
Effective search space used: 13924477735
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)