BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07546 (UTR included)
(4609 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057B2B03 696 0.0
>BF01057B2B03
Length = 800
Score = 696 bits (351), Expect = 0.0
Identities = 357/360 (99%)
Strand = Plus / Plus
Query: 4071 cgggtccgcgccccgccgtcgcttctcgtcgcttgctgacggaaccttgatattgtataa 4130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgggtccgcgccccgccgtcgcttctcgtcgcttgctgacggaaccttgatattgtataa 500
Query: 4131 acgttattcacgcgacgcttagccgccattaccctctagtctcttctgcttaatatagat 4190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acgttattcacgcgacgcttagccgccattaccctctagtctcttctgcttaatatagat 560
Query: 4191 attttaaatatgtaataatgaatttacttgatgatagcgttaagggttatgtatttatgg 4250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attttaaatatgtaataatgaatttacttgatgatagcgttaagggttatgtatttatgg 620
Query: 4251 cggttgccgtgccgccattttgcaattctgctcgtgagtgagaccgtcagaattgcagaa 4310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cggttgccgtgccgccattttgcaattctgctcgtgagtgagaccgtcagaattgcagaa 680
Query: 4311 gcgagggtaggttttaatcgcttgggagcggaggtcgttcgggagctcccgtcactgtct 4370
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 681 gcgagggtaggttttaatcgcttgggagcggnnntcgttcgggagctcccgtcactgtct 740
Query: 4371 agtctacgaacagcttccgtctcatagttttatcgacgataaagtgaatattgttgagac 4430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtctacgaacagcttccgtctcatagttttatcgacgataaagtgaatattgttgagac 800
Score = 283 bits (143), Expect = 1e-75
Identities = 199/220 (90%), Gaps = 17/220 (7%)
Strand = Plus / Plus
Query: 3866 gaagacgagcaggcccggcccggacacggcccggggaggcggccgtcgggccggtccata 3925
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 77 gaagacgagcaggcccggcccggacacggcccggggaggcggccgtcgggccggtctgta 136
Query: 3926 cgcggtcacactaggacgtg----------------gctcagcgagcgggagcagcgcgc 3969
|||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 137 cgcggtcacactaggacgtgttaccggctctgcgcggctcagcgagcgtgagcagcgcgc 196
Query: 3970 tgtgcggcgctcctcacgaggaacggccgcgggagggtagttgtatatggagccggccgg 4029
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 197 tgtgcggcgctcctcacgaggaacggccgcgggagggtagttgtatatggagctggcc-g 255
Query: 4030 ggcccggggcggggcctcggactattgtttattcgtttcg 4069
||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ggcccggggcggggcctcggactattgtttattcgtttcg 295
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 358,806
Number of extensions: 6874
Number of successful extensions: 6874
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6873
Number of HSP's successfully gapped: 3
Length of query: 4609
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4591
Effective length of database: 8,109,745
Effective search space: 37231839295
Effective search space used: 37231839295
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)