BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07552 (UTR included)
(2845 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2636_C1 283 8e-76
BF14_940_C1 246 2e-64
BF01021A2F10 92 6e-18
BF01025A1H05 86 4e-16
BF14_1341_C1 80 2e-14
BF01038A2H08 78 9e-14
>BF14_2636_C1
Length = 967
Score = 283 bits (143), Expect = 8e-76
Identities = 143/143 (100%)
Strand = Plus / Plus
Query: 2703 aagtaacaaacggttctattagtgtgatatatattgaaaattcttgaaagaaagcaataa 2762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 aagtaacaaacggttctattagtgtgatatatattgaaaattcttgaaagaaagcaataa 74
Query: 2763 aatggttgaaaataatgaagtcgaactctcagaggcagaggctgaacaatatgatagaca 2822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aatggttgaaaataatgaagtcgaactctcagaggcagaggctgaacaatatgatagaca 134
Query: 2823 aatccgtctatggggcttggaat 2845
|||||||||||||||||||||||
Sbjct: 135 aatccgtctatggggcttggaat 157
>BF14_940_C1
Length = 1130
Score = 246 bits (124), Expect = 2e-64
Identities = 124/124 (100%)
Strand = Plus / Minus
Query: 1 gttttttcaagttttaattcacttcccatttggctgtaattatcaagatacaggaacgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gttttttcaagttttaattcacttcccatttggctgtaattatcaagatacaggaacgca 65
Query: 61 tatcaaactgaccgtacaagaaaattctaaatttatttagatcttcatttacataaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tatcaaactgaccgtacaagaaaattctaaatttatttagatcttcatttacataaatcc 5
Query: 121 cagt 124
||||
Sbjct: 4 cagt 1
>BF01021A2F10
Length = 792
Score = 91.7 bits (46), Expect = 6e-18
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 2594 ggctcaaaaggactcgtatccagagtcgtaaaaacatttacaaaaaaaaa 2643
||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96 ggctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaaa 47
>BF01025A1H05
Length = 756
Score = 85.7 bits (43), Expect = 4e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 2594 ggctcaaaaggactcgtatccagagtcgtaaaaacatttacaaaaaaaaaa 2644
||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 295 ggctcaaaaggactcgtatccagagccctaaaaacatttacaaaaaaaaaa 245
>BF14_1341_C1
Length = 1009
Score = 79.8 bits (40), Expect = 2e-14
Identities = 50/52 (96%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 2594 ggctcaaaaggactcgtatccagagtcgt-aaaaacatttacaaaaaaaaaa 2644
||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 944 ggctcaaaaggactcgtatccagagccgtaaaaaacatttacaaaaaaaaaa 995
>BF01038A2H08
Length = 781
Score = 77.8 bits (39), Expect = 9e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 2596 ctcaaaaggactcgtatccagagtcgtaaaaacatttacaaaaaaaa 2642
||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 525 ctcaaaaggactcgtatccagagccgtaaaaatatttacaaaaaaaa 479
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 430,055
Number of extensions: 9881
Number of successful extensions: 9881
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 9880
Number of HSP's successfully gapped: 6
Length of query: 2845
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2828
Effective length of database: 8,119,229
Effective search space: 22961179612
Effective search space used: 22961179612
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)