BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07563 (UTR included)
(6352 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A2B01 1463 0.0
BF01005A1B11 680 0.0
>BF01042A2B01
Length = 767
Score = 1463 bits (738), Expect = 0.0
Identities = 760/766 (99%), Gaps = 1/766 (0%)
Strand = Plus / Plus
Query: 5226 gaaagacatcaagactattatggtgtgagagaaagacgggaatctccttcgcgaggtttc 5285
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 3 gaaagacatcaagactattatggtgtgacataaagacgggaatctccttcgcgaggtttc 62
Query: 5286 aatagggagtcgcattcaagcgaggcgagtgagagggtgccagtgagggtcgacagagaa 5345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aatagggagtcgcattcaagcgaggcgagtgagagggtgccagtgagggtcgacagagaa 122
Query: 5346 gctcctgtgagagacaagttgcaacgaagacttagcttagaatcagccagggaactcact 5405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gctcctgtgagagacaagttgcaacgaagacttagcttagaatcagccagggaactcact 182
Query: 5406 gacagttcaagcgaagtggacgacactttttatagtacaactggcaggaagcgagcgaac 5465
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 183 gacagttcaagcgaagtggacgacactttctatagtacaactggcaggaaacgagcgaac 242
Query: 5466 aagcaccacagaaccattgaacagtatgaacgtgaaatagagaggctaaaatgttcagtg 5525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aagcaccacagaaccattgaacagtatgaacgtgaaatagagaggctaaaatgttcagtg 302
Query: 5526 gaacttctaagggggcgcttggggccaactgattctggccaagatcaaacagatgccaaa 5585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gaacttctaagggggcgcttggggccaactgattctggccaagatcaaacagatgccaaa 362
Query: 5586 atgaaggctattatatccagattaatttgcgtagaagaggagcttcgccgggaacagcgt 5645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atgaaggctattatatccagattaatttgcgtagaagaggagcttcgccgggaacagcgt 422
Query: 5646 aagatggccgccgctctgtcacacaagcaacgcgtgattgaagcccaggaacatcgtata 5705
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aaaatggccgccgctctgtcacacaagcaacgcgtgattgaagcccaggaacatcgtata 482
Query: 5706 gcagctctagatgaagctaatacgaggctattatcagctctcgttcacttgcaacagaga 5765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gcagctctagatgaagctaatacgaggctattatcagctctcgttcacttgcaacagaga 542
Query: 5766 gcaccccaccctccctcacacaacaacaaccatagcacctcccactccccccactcacaa 5825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gcaccccaccctccctcacacaacaacaaccatagcacctcccactccccccactcacaa 602
Query: 5826 cactcgcatcaggaattacagatttaatgtaccttcttgttttctacgcagggttgccag 5885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 cactcgcatcaggaattacagatttaatgtaccttcttgttttctacgcagggttgccag 662
Query: 5886 tttaaagtctattttaagcaatacgatacccatacgattatgtttaatctaatgcgatct 5945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tttaaagtctattttaagcaatacgatacccatacgattatgtttaatctaatgcgatct 722
Query: 5946 ctgtacaagtaggcgtttcgaaaggatttttttttactctgtttac 5991
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 723 ctgtacaagtaggcgtttcgaaagga-ttttttttactctgtttac 767
>BF01005A1B11
Length = 650
Score = 680 bits (343), Expect = 0.0
Identities = 349/351 (99%)
Strand = Plus / Plus
Query: 6002 actaaatgtgactgccatcaatccaaatttctaaattatataccttataatattttatgc 6061
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actaaatgtgactgccatcaatccaaatttctaaattatataccttataatattttatgt 60
Query: 6062 gtaaacaatcataatttttacaattttatctatgtatatttgtcaaataaatttgactat 6121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtaaacaatcataatttttacaattttatctatgtatatttgtcaaataaatttgactat 120
Query: 6122 taaattttgttctataaaattgaattttttgcacaatttctttcttgattaataagtttt 6181
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 taaattttgttctataaaattgaattttttgcacaatttctttctcgattaataagtttt 180
Query: 6182 gcatttcaatattatttcgtatctctaagctaatatagtttgacttaatatgagatgatt 6241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcatttcaatattatttcgtatctctaagctaatatagtttgacttaatatgagatgatt 240
Query: 6242 attgttgtaattaaagtaaccctatcacaatcgtgacgttttttgtataacttttgttaa 6301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attgttgtaattaaagtaaccctatcacaatcgtgacgttttttgtataacttttgttaa 300
Query: 6302 atgtttcttgtttctctagttttaatgtacaatgctttaaatgacactaat 6352
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgtttcttgtttctctagttttaatgtacaatgctttaaatgacactaat 351
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 81,384
Number of extensions: 8588
Number of successful extensions: 8588
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8587
Number of HSP's successfully gapped: 2
Length of query: 6352
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6334
Effective length of database: 8,109,745
Effective search space: 51367124830
Effective search space used: 51367124830
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)