BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07583 (UTR included)
(13,759 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3388_C1 1762 0.0
BF01059B1C12 313 4e-84
BF01055B2A04 100 1e-19
BF14_335_C2 78 4e-13
BF01031B2E06 72 3e-11
>BF14_3388_C1
Length = 978
Score = 1762 bits (889), Expect = 0.0
Identities = 912/917 (99%), Gaps = 2/917 (0%)
Strand = Plus / Plus
Query: 11897 ggcgatgcgtccgctcgccatcagactcgatgagaggttgatcttactgctgtggtcctg 11956
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcgatgcgtccgctcgccatcaggctcgatgagaggttgatcttactgctgtggtcctg 60
Query: 11957 ggtggatggcggcggggagcgcgaagagggagcggtcgaggaagagcccgacgaggcgga 12016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtggatggcggcggggagcgcgaagagggagcggtcgaggaagagcccgacgaggcgga 120
Query: 12017 gtacgagacgaggcgcgtgctgcacgagctgaccgcgctgcacgccaccagatactactt 12076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtacgagacgaggcgcgtgctgcacgagctgaccgcgctgcacgccaccagatactactt 180
Query: 12077 cgcgcttatcaagatcataccgagccagatccgcctgtcgatgttcaccgccaacaaact 12136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgcgcttatcaagatcataccgagccagatccgcctgtcgatgttcaccgccaacaaact 240
Query: 12137 ggaaggcgagctggcggcactgaagaggtcgctggggctcacgctggtgcgcttcgagga 12196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaaggcgagctggcggcactgaagaggtcgctggggctcacgctggtgcgcttcgagga 300
Query: 12197 cgcagccgtggagctggagcccttcgccagggcgcacgccttcgacacggccgcggcgct 12256
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgcagccgtggagctcgagcccttcgccagggcgcacgccttcgacacggccgcggcgct 360
Query: 12257 ggcgcgacatctgcttcagcacttcaaagacgagttgaagtggcaagccgccaagattct 12316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcgcgacatctgcttcagcacttcaaagacgagttgaagtggcaagccgccaagattct 420
Query: 12317 ggggtcagtagacttcctcgggaacccgttgggtttcgtcgcggacgtgtcggagggcgt 12376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggggtcagtagacttcctcgggaacccgttgggtttcgtcgcggacgtgtcggagggcgt 480
Query: 12377 gtcgggactcctggagggcaacgtgagagccctgtttaagaacgtcactcacgggatttc 12436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtcgggactcctggagggcaacgtgagagccctgtttaagaacgtcactcacgggatttc 540
Query: 12437 caactctgcggccaaagtcaccgaaactctgggggacgggctggagcgcgtggtggcgga 12496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caactctgcggccaaagtcaccgaaactctgggggacgggctggagcgcgtggtggcgga 600
Query: 12497 cgaggcccacgaggagacgcgccgccggattcgctccggagctgctggggcccatctcgc 12556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgaggcccacgaggagacgcgccgccggattcgctccggagctgctggggcccatctcgc 660
Query: 12557 cgccggcttccgaggactgggcctgggattgctgggaggtctgacgtcactggcgaagca 12616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgccggcttccgaggactgggcctgggattgctgggaggtctgacgtcactggcgaagca 720
Query: 12617 tagctacgagggcgccgcggccgagggtgtggcagggttcctggccggggtcggcaaggg 12676
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 721 tagctacgagggcgccgcggccgagggtgtggcagggttcctggccggagtcggcaaggg 780
Query: 12677 gctcgtgggcaccgtcaccaagcccatgatcggcgtgctggatctggccactgaaaccgc 12736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gctcgtgggcaccgtcaccaagcccatgatcggcgtgctggatctggccactgaaaccgc 840
Query: 12737 ggcggccgtgcgggacagcgcacgccggggcgggggcgctccggga-gggcgcgcg-ccc 12794
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 841 ggcggccgtgcgggacagcgcacgccggggcgggggcgctccgggacgggcgcgcgcccc 900
Query: 12795 ccgcctggccgccgcgg 12811
|||||||||||||||||
Sbjct: 901 ccgcctggccgccgcgg 917
Score = 73.8 bits (37), Expect = 7e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 12811 gcgagctggcagccggcgcggcgctgctgctggcact 12847
|||||||||||||||||||||||||||||||||||||
Sbjct: 942 gcgagctggcagccggcgcggcgctgctgctggcact 978
>BF01059B1C12
Length = 715
Score = 313 bits (158), Expect = 4e-84
Identities = 161/162 (99%)
Strand = Plus / Minus
Query: 13556 acaaagcgcatcaagacagttgtatagagaggggaaatttatacactgtcaaaaaattat 13615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 acaaagcgcatcaagacagttgtatagagaggggaaatttatacactgtcaaaaaattat 656
Query: 13616 aaagattgtaatacgtgttgtgacacaggaccgacctacaacgactgatgacgactgttg 13675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 aaagattgtaatacgtgttgtgacacaggaccgacctacaacgactgatgacgactgttg 596
Query: 13676 actagtgttgacgactgttgactagtgttgacgactgttgac 13717
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 595 actagtgttgacgactgttgactagtgttgccgactgttgac 554
Score = 99.6 bits (50), Expect = 1e-19
Identities = 53/54 (98%)
Strand = Plus / Minus
Query: 13704 tgacgactgttgactagtgttgacgactgttgactagtgttgacgactgttgac 13757
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 607 tgacgactgttgactagtgttgacgactgttgactagtgttgccgactgttgac 554
Score = 71.9 bits (36), Expect = 3e-11
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 13724 tgacgactgttgactagtgttgacgactgttgacta 13759
||||||||||||||||||||||||||||||||||||
Sbjct: 607 tgacgactgttgactagtgttgacgactgttgacta 572
>BF01055B2A04
Length = 830
Score = 99.6 bits (50), Expect = 1e-19
Identities = 97/112 (86%), Gaps = 3/112 (2%)
Strand = Plus / Minus
Query: 6820 agcttacggttccttgggaaagcaacatccccaaagaccatgccatcaaggcgaataagt 6879
|||||||| |||| ||| ||| ||||||||||||||||| ||||| | ||| |||||||
Sbjct: 537 agcttacgattccctggaaaaccaacatccccaaagaccgtgccaccgaggtcaataagt 478
Query: 6880 attacgagctcactaacgaactcactaggaatagcttcgtcgtaaatttgta 6931
| | |||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 477 a---caagctcactaacgaactcactaggaatagattcgtcgtaaacttgta 429
>BF14_335_C2
Length = 1827
Score = 77.8 bits (39), Expect = 4e-13
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 6824 tacggttccttgggaaagcaacatccccaaagaccatgccatcaaggcgaataagtatta 6883
||||||||||||| | | ||||||||||||| ||||||||||||||| || ||||||||
Sbjct: 1228 tacggttccttggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtatta 1169
Query: 6884 cgagctcacta 6894
||||||||||
Sbjct: 1168 tgagctcacta 1158
>BF01031B2E06
Length = 707
Score = 71.9 bits (36), Expect = 3e-11
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 6837 gaaagcaacatccccaaagaccatgccatcaaggcgaataagtattacg-agctcactaa 6895
|||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 128,746
Number of extensions: 15094
Number of successful extensions: 15094
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 15089
Number of HSP's successfully gapped: 9
Length of query: 13759
Length of database: 8,280,457
Length adjustment: 19
Effective length of query: 13740
Effective length of database: 8,100,261
Effective search space: 111297586140
Effective search space used: 111297586140
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 36 (71.9 bits)