BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07584 (UTR included)
(1972 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B2H09 1080 0.0
>BF01016B2H09
Length = 679
Score = 1080 bits (545), Expect = 0.0
Identities = 554/557 (99%)
Strand = Plus / Plus
Query: 676 caggtctgtgtggtgacgccaagctggtggagttgggtggccctccgtacctggtgccca 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 caggtctgtgtggtgacgccaagctggtggagttgggtggccctccgtacctggtgccca 182
Query: 736 cggtgagacgcgacaagctgtattccttgacggacttgttgcgccacctccgccgagacc 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cggtgagacgcgacaagctgtattccttgacggacttgttgcgccacctccgccgagacc 242
Query: 796 cggcgctgttggcgggagccggtgccggaccctggccctacctcggagtcaactgtgagg 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cggcgctgttggcgggagccggtgccggaccctggccctacctcggagtcaactgtgagg 302
Query: 856 gtatcatcaacgtttacgtcaaagacagcgccgtgtctcagggttcgcacgtggtgtccg 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gtatcatcaacgtttacgtcaaagacagcgccgtgtctcagggttcgcacgtggtgtccg 362
Query: 916 tgtcgccggtgggcgcgcccaagggtcagtcgtcgtttgttcaggaaaagctgccggcca 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgtcgccggtgggcgcgcccaagggtcagtcgtcgtttgttcaggaaaagctgccggcca 422
Query: 976 gcgagactcgcaccgccttactcgggaactacctgttgtccaacggagagccggggatgg 1035
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gcgagactcgcaccgctttactcgggaactacctgttgtccaacggagagccggggatgg 482
Query: 1036 tgatcaaagtagtcgctaaaaaacgcatcggcgagaaaaacttcatcaccgccatcagag 1095
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tgatcaaagtggtcgctaaaaaacgcatcggcgagaaaaacttcatcaccgccatcagag 542
Query: 1096 aggcgctcaaagagcactatggagataaagtagtaggtctcggcgggacgttcgcgctgc 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aggcgctcaaagagcactatggagataaagtagtaggtctcggcgggacgttcgcgctgc 602
Query: 1156 tcgagggtcgggcgaagcaccacgtgatgccggacttctcggccactcctctgtgtagcg 1215
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tcgagggtagggcgaagcaccacgtgatgccggacttctcggccactcctctgtgtagcg 662
Query: 1216 attccgacgtggactcc 1232
|||||||||||||||||
Sbjct: 663 attccgacgtggactcc 679
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 166,907
Number of extensions: 3330
Number of successful extensions: 3330
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3330
Number of HSP's successfully gapped: 1
Length of query: 1972
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1955
Effective length of database: 8,119,229
Effective search space: 15873092695
Effective search space used: 15873092695
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)