BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07598 (UTR included)
(2794 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025A1G10 1507 0.0
>BF01025A1G10
Length = 772
Score = 1507 bits (760), Expect = 0.0
Identities = 763/764 (99%)
Strand = Plus / Plus
Query: 1926 tccacatctgaagagaatgacacgtccgttgttaaattggtcgactttggtggctacctc 1985
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tccacgtctgaagagaatgacacgtccgttgttaaattggtcgactttggtggctacctc 68
Query: 1986 acagttgacaatgaccagcttaagcagatccgctcggacttcatgacgctgcctttccaa 2045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 acagttgacaatgaccagcttaagcagatccgctcggacttcatgacgctgcctttccaa 128
Query: 2046 gccaccgaagcactgctagcatttgtaaaacccgccaatagcgagagcgaatggagtggt 2105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gccaccgaagcactgctagcatttgtaaaacccgccaatagcgagagcgaatggagtggt 188
Query: 2106 gaggctcttcgtataatggctggtctgacggcgggtcaactcctccacgcacaggtcgcc 2165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gaggctcttcgtataatggctggtctgacggcgggtcaactcctccacgcacaggtcgcc 248
Query: 2166 ggctacgacgagcgaggactgccgctagtacatctttatctaacacttagcccacagcaa 2225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggctacgacgagcgaggactgccgctagtacatctttatctaacacttagcccacagcaa 308
Query: 2226 gttatattcctgaaccgcgagctggtggaccgcgggctggcggagtgggacctgccggcg 2285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gttatattcctgaaccgcgagctggtggaccgcgggctggcggagtgggacctgccggcg 368
Query: 2286 gattcgtgaaggactccctacataatatgagattgcatttctctacaactgttgactcac 2345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gattcgtgaaggactccctacataatatgagattgcatttctctacaactgttgactcac 428
Query: 2346 gaggaagcgcgatctctcattatgggtcacgtgtgcccgtcagcgaccggcactagtggg 2405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gaggaagcgcgatctctcattatgggtcacgtgtgcccgtcagcgaccggcactagtggg 488
Query: 2406 ctgattaaattaaagtttccttcagtgacttgtgtttgatgctgtatgatgtaaaaactt 2465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctgattaaattaaagtttccttcagtgacttgtgtttgatgctgtatgatgtaaaaactt 548
Query: 2466 atgtcagatgttaaattttaggtattgactggtttctaccacaggactaacttaccgact 2525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 atgtcagatgttaaattttaggtattgactggtttctaccacaggactaacttaccgact 608
Query: 2526 tcctcagttaccggttcatgtgtttattttattgcttcaccatattatcttcccgtttct 2585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tcctcagttaccggttcatgtgtttattttattgcttcaccatattatcttcccgtttct 668
Query: 2586 tctcctacacatacttatactagtaacgaaacaacttgttattactcgcgttaacgacaa 2645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tctcctacacatacttatactagtaacgaaacaacttgttattactcgcgttaacgacaa 728
Query: 2646 atattatctcatagttaaattaggagtaatttgacgcttgtata 2689
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 atattatctcatagttaaattaggagtaatttgacgcttgtata 772
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 316,896
Number of extensions: 6207
Number of successful extensions: 6207
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6207
Number of HSP's successfully gapped: 1
Length of query: 2794
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2777
Effective length of database: 8,119,229
Effective search space: 22547098933
Effective search space used: 22547098933
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)