BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07623 (UTR included)
(1834 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01001X1C04 595 e-169
BF01019B2C04 537 e-152
>BF01001X1C04
Length = 709
Score = 595 bits (300), Expect = e-169
Identities = 309/312 (99%)
Strand = Plus / Plus
Query: 1028 caggcaggacacggtcatagagaacgtccgctacaaggagaacggtgccgcggacgttga 1087
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 12 caggcaggacacggtcatagagaacgtccgctacaaggagaacggcgccgcggacgttga 71
Query: 1088 agatgtttcgcccgagggtatggaggagagcaccatatatgaagacctggacgatgaccc 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 agatgtttcgcccgagggtatggaggagagcaccatatatgaagacctggacgatgaccc 131
Query: 1148 cggactgtcagccagagcgctgtatgactaccaggctgctgatgagtccgagatcacatt 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cggactgtcagccagagcgctgtatgactaccaggctgctgatgagtccgagatcacatt 191
Query: 1208 cgacccgggtgatgtgatcacacacattgagcaggtggatgccggctggtggcagggact 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 192 cgacccgggtgatgtgatcacacacattgagcaggtggatgccggctggtggcagggtct 251
Query: 1268 cggcccccggggacattttggactcttccccgctaactatgtagaactactgcctccacc 1327
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cggcccccggggacattttggcctcttccccgctaactatgtagaactactgcctccacc 311
Query: 1328 acgctaggtaat 1339
||||||||||||
Sbjct: 312 acgctaggtaat 323
Score = 531 bits (268), Expect = e-150
Identities = 292/299 (97%), Gaps = 2/299 (0%)
Strand = Plus / Plus
Query: 1538 aggtaattttatatcgccacctacatctgtatgtcggccgctactccgacaaggatcctt 1597
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 317 aggtaattttatatcgacacctacatctgtatgtcgaccgctactccgacaaggatcctt 376
Query: 1598 gctatcaaaatgtttacactaaacctcggttaagtattgagttaattcgagatttataac 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gctatcaaaatgtttacactaaacctcggttaagtattgagttaattcgagatttataac 436
Query: 1658 agcaactaaactcatttgctatcagctacgtacgttttatgta--ttttttttatataac 1715
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 437 agcaactaaactcattcgctatcagctacgtacgttttatgtattttttttttatatatc 496
Query: 1716 gaccaaactacacatatgtatattattagaattacaaatgtgacgtcagcagcaataaaa 1775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gaccaaactacacatatgtatattattagaattacaaatgtgacgtcagcagcaataaaa 556
Query: 1776 tatctttattttcataataagattaattttaaattagacgtccaggaactattgactta 1834
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tatctttattttcataaaaagattaattttaaattagacgtccaggaactattgactta 615
>BF01019B2C04
Length = 642
Score = 537 bits (271), Expect = e-152
Identities = 280/284 (98%)
Strand = Plus / Plus
Query: 12 cagggcgaaggcgctccgactgtacgaaagggaacgtgcgctaatcatatcaagcatgtg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cagggcgaaggcgctccgactgtacgaaagggaacgtgcgctaatcatatcaagcatgtg 418
Query: 72 tcccagctgttcaacggtttccatgcaaccatgcatgcgaggactgaagacgatctggac 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tcccagctgttcaacggtttccatgcaaccatgcatgcgaggactgaagacgatctggac 478
Query: 132 gagaagatcatattggataaactggctaaagctggctccgcattcaacttcaagtctagg 191
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 479 gagaagatcatattggataaactggctaaagctggctcggcattcaacttcaagtctagg 538
Query: 192 accgaggagttaccgcccagtggacctgtcgggaccacgtataagaaagttaatcctgtt 251
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 539 accgaggagttaccgcccagtggacctgtcgggaccacgtatannnaagttaatcctgtt 598
Query: 252 caagaaatcaattccaaggaaagggaccagttttggatgaaaga 295
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 caagaaatcaattccaaggaaagggaccagttttggatgaaaga 642
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 198,738
Number of extensions: 4467
Number of successful extensions: 4467
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4466
Number of HSP's successfully gapped: 3
Length of query: 1834
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1817
Effective length of database: 8,119,229
Effective search space: 14752639093
Effective search space used: 14752639093
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)