BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07673 (UTR included)
(3238 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A2F09 1334 0.0
>BF01044A2F09
Length = 746
Score = 1334 bits (673), Expect = 0.0
Identities = 700/709 (98%)
Strand = Plus / Plus
Query: 1506 caactgttgcaaagctcaatcgccgctcacatgcccggggagaaaaataagattgatatt 1565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 caactgttgcaaagctcaatcgccgctcacatgcccggggagaaaaataagattgatatt 97
Query: 1566 ccagaggaagtgaacaatgaggtcacggtatcagccttgcagttcgcagaagtcttcttc 1625
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 98 ccagaggaagtgaacaatgaggtcacggtatccgccttgcagttcgcagaagtcttcttc 157
Query: 1626 actgtttgtggaagattcctcaaaccggccacacataagttattccaagagcgtgtcatc 1685
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 actgtttgcggaagattcctcaaaccggccacacataagttattccaagagcgtgtcatc 217
Query: 1686 cgccatcactcagcaggtgagacgttgctgtacctgcgagtgctggaggcgagtcgcaag 1745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 cgccatcactcagcaggtgagacgttgctgtacctgcgagtgctggaggcgagtcgcaag 277
Query: 1746 acgacgccggcgaccgtggcgccaccgacacagtactgtcttcatatatacagtacgctt 1805
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 278 acgacgcccgcgaccgtggctccaccgacacagtactgtctacatatatacagtacgctt 337
Query: 1806 gtgaacagctccgacgccgagatatcaaaattctgtagccaagctctactggatataaga 1865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gtgaacagctccgacgccgagatatcaaaattctgtagccaagctctactggatataaga 397
Query: 1866 ctgcacctatattgctcgccgccgtccatcaacctggctatagaaatacctcaagatgaa 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ctgcacctatattgctcgccgccgtccatcaacctggctatagaaatacctcaagatgaa 457
Query: 1926 gaggaaacggcgaataaaaggaagaaggtctcgtccaaaaacagggccatgttagagtat 1985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gaggaaacggcgaataaaaggaagaaggtctcgtccaaaaacagggccatgttagagtat 517
Query: 1986 ctattagggccggataaagtgccccgagataaagaagacgatattataacgattccagac 2045
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 518 ctattagggccggataaagtgccccgagataaagaagacgatgttataacgattccagac 577
Query: 2046 gaaccgtcgaataagaaacaacgtgtcgacgaattggatagaataagtctaagcagcgat 2105
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 578 gaaccgtcgaataagaaacaacgtatcgacgaattggatagaataagtttaagcagcgat 637
Query: 2106 tccaccagcactgttaagataccgtacggaacagacatcagctcagactcggacggagat 2165
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 638 tccaccagcactgttaagataccgtacggaacagacatcagctcagactcggacggggat 697
Query: 2166 aacgtcatggaggtcgacgtagtcgtcgaaatgaatcacaccacaggca 2214
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 aacgtcatggaggtcgacgtagtcgtcgaaatgaatcacaccacaggca 746
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 365,851
Number of extensions: 6617
Number of successful extensions: 6617
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6617
Number of HSP's successfully gapped: 1
Length of query: 3238
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3220
Effective length of database: 8,109,745
Effective search space: 26113378900
Effective search space used: 26113378900
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)