BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07679 (UTR included)
(1491 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2540_C1 622 e-178
BF14_335_C4 123 9e-28
BF01016B1E06 115 2e-25
BF01043B1E03 100 1e-20
BF01049B1F01 98 5e-20
BF01019A1H08 98 5e-20
BF14_335_C5 94 8e-19
BF14_335_C2 90 1e-17
BF01017A1F03 80 1e-14
BF01021A2B11 76 2e-13
>BF14_2540_C1
Length = 1158
Score = 622 bits (314), Expect = e-178
Identities = 335/342 (97%)
Strand = Plus / Plus
Query: 43 aggtattcttcacactatgtacacagaccccaacctcatctcagactacatgccagtgga 102
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 aggtattcttcacacaatgtacacagaccccaacctcatctcagactacatgccagtgga 876
Query: 103 catagctataaaagctttcatagctgccgcgtgggcaagaggtaccaaaaagctggaacc 162
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 877 catagctataaaagctttcatagctgccgcgtgggcaagaggtaccaaaaaactggaacc 936
Query: 163 aacagacgacatacatctgtataactgctcatcaagcgaaatcaaagcgttgactatggg 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 aacagacgacatacatctgtataactgctcatcaagcgaaatcaaagcgttgactatggg 996
Query: 223 tcagatagtcgaattggggatggaaataagtaaaaagatccccttggattcgttagtatg 282
||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 997 tcagatagttgaattggggatggaaataagtaaaaagattccattggattcgttagtatg 1056
Query: 283 gcatccctgcggaggcttaacttcatccaagctagttaattacgtaaaggtcctgctatt 342
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1057 gcatccctgcggaggcttaacttcatcaaagctagttaattacgtaaaggtcctgctatt 1116
Query: 343 acacctactaccggctctgttagttgatgggattttgaaact 384
|||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1117 acacctactaccggctttgttagttgatgggattttgaaact 1158
>BF14_335_C4
Length = 1491
Score = 123 bits (62), Expect = 9e-28
Identities = 174/210 (82%), Gaps = 1/210 (0%)
Strand = Plus / Minus
Query: 884 gagacggaacctcccatcattccatggattcacggtgtgggggtcgggttcatcgcgttt 943
|||||| || ||| || |||||||||||||||| ||| || | ||| |||||||||
Sbjct: 1364 gagacgaaaactctcagcattccatggattcaccgtgcggttgcggggaccatcgcgttg 1305
Query: 944 cagggagaggagctgcagcaaagcctggaacttgcgacccaggtgtaggtttaaggggtc 1003
|||| ||||||||| || || |||||| ||||||||||||||||||||||||||||| |
Sbjct: 1304 cagg-agaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtttaaggggcc 1246
Query: 1004 cctatccaacgagcgttaaacgctcacccccaccatccaagctcctctctctacctcacc 1063
|||| ||| || ||||||||||||| | || ||||||||||||||||||||| |||
Sbjct: 1245 tttatcttacgcgcattaaacgctcacctcaactttccaagctcctctctctacctaacc 1186
Query: 1064 aaatttgaaacgaacttactagggctgcct 1093
|||| |||| ||| | | ||||||||||||
Sbjct: 1185 aaatatgaatcgatcctgctagggctgcct 1156
>BF01016B1E06
Length = 606
Score = 115 bits (58), Expect = 2e-25
Identities = 89/97 (91%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 977 gcgacccaggtgtaggtttaaggggtccctatccaacgagcgttaaacgctcacccccac 1036
||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| ||||
Sbjct: 230 gcgacccaggtgtaggtttaagggg-ccctatctaacg--cgttaaacgctcacctccac 286
Query: 1037 catccaagctcctctctctacctcaccaaatttgaaa 1073
| ||||| ||||||||||||||| |||||||||||||
Sbjct: 287 cgtccaatctcctctctctacctaaccaaatttgaaa 323
>BF01043B1E03
Length = 830
Score = 99.6 bits (50), Expect = 1e-20
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 973 acttgcgacccaggtgtaggtttaaggggtccctatccaacgagcgttaaacgctcaccc 1032
|||||| |||||||| ||||||||| ||| ||||||| |||| ||||||| |||||||
Sbjct: 420 acttgcaacccaggtataggtttaaagggcccctatctaacgcgcgttaagtgctcacct 361
Query: 1033 ccaccatccaagctcctctctctacctcaccaaatttgaaac 1074
|||| |||||| |||||||||||||| ||||||||||||||
Sbjct: 360 ccactgtccaaggtcctctctctacctaaccaaatttgaaac 319
>BF01049B1F01
Length = 840
Score = 97.6 bits (49), Expect = 5e-20
Identities = 104/121 (85%), Gaps = 1/121 (0%)
Strand = Plus / Plus
Query: 939 cgtttcagggagaggagctgcagcaaagcctggaacttgcgacccaggtgtaggtttaag 998
|||| |||||||||||||| || || |||||| ||||||||||||||||||||| ||||
Sbjct: 587 cgttgcagggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtgtaag 646
Query: 999 gggtccctatccaacgagcgttaaacgctcacccccaccatccaagctcctctctctacc 1058
||| ||||||| ||| |||||||| | |||| | ||| ||||||||||||||||||||
Sbjct: 647 ggg-ccctatctaactcccgttaaacacccacctctaccgtccaagctcctctctctacc 705
Query: 1059 t 1059
|
Sbjct: 706 t 706
>BF01019A1H08
Length = 504
Score = 97.6 bits (49), Expect = 5e-20
Identities = 88/101 (87%)
Strand = Plus / Plus
Query: 901 cattccatggattcacggtgtgggggtcgggttcatcgcgtttcagggagaggagctgca 960
||||| |||||||||| ||| ||| | ||||| ||||||||| |||||||||||||| ||
Sbjct: 381 cattcaatggattcaccgtgcgggtgccgggtccatcgcgttgcagggagaggagcttca 440
Query: 961 gcaaagcctggaacttgcgacccaggtgtaggtttaagggg 1001
|| |||||| | |||||||||||||||||||||||||||
Sbjct: 441 acagtgcctgggagttgcgacccaggtgtaggtttaagggg 481
>BF14_335_C5
Length = 1597
Score = 93.7 bits (47), Expect = 8e-19
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 947 ggagaggagctgcagcaaagcctggaacttgcgacccaggtgtaggtttaaggggtccct 1006
||||||||||| || || |||||| |||||||| |||||||||||||| | ||||
Sbjct: 1550 ggagaggagcttcaacagtgcctgggacttgcgannnnngtgtaggtttaaggcgcccct 1491
Query: 1007 atccaacgagcgttaaacgctcacccccaccatccaagctcctctctctacctc 1060
|| |||| || ||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1490 gtctaacgcgcattaaacgctcacctccaccgtccaagctcctctctctacctc 1437
>BF14_335_C2
Length = 1827
Score = 89.7 bits (45), Expect = 1e-17
Identities = 153/186 (82%), Gaps = 6/186 (3%)
Strand = Plus / Plus
Query: 907 atggattcacggtgtgggggtcgggttcatcgcgtttcagggagaggagctgcagcaaag 966
|||||||||| ||| ||| | ||||| | |||||| |||||||||||||| || || |
Sbjct: 831 atggattcaccgtgcgggtgccgggtccgccgcgttgcagggagaggagcttcaacagtg 890
Query: 967 cctggaacttgcgacccaggtgtaggtttaaggggtccctatccaacgagcgttaa--ac 1024
||||| | ||||||| |||||||||||||||| | ||||||| ||| |||| | ||
Sbjct: 891 cctgggatttgcgacacaggtgtaggtttaagagc-ccctatctaactcgcgtacataac 949
Query: 1025 gctcacccccaccatccaagctcctctctctacctcaccaaatttgaaacgaacttacta 1084
||||||| ||||| ||||||||||||||| ||| |||||||||||||||||| |||||
Sbjct: 950 gctcacctccaccgtccaagctcctctct---cctaaccaaatttgaaacgaacctacta 1006
Query: 1085 gggctg 1090
| ||||
Sbjct: 1007 gagctg 1012
>BF01017A1F03
Length = 782
Score = 79.8 bits (40), Expect = 1e-14
Identities = 99/118 (83%), Gaps = 3/118 (2%)
Strand = Plus / Minus
Query: 974 cttgcgacccaggtgtaggtttaaggggtccctatccaacgagcgttaaacgctcacccc 1033
||||||||||||||||||||||| || |||||| || | |||||||||||||||| |
Sbjct: 287 cttgcgacccaggtgtaggtttaggga---cctatctaatgcgcgttaaacgctcacctc 231
Query: 1034 caccatccaagctcctctctctacctcaccaaatttgaaacgaacttactagggctgc 1091
|||| | ||||||||||||||| || ||||| || ||||| || ||||||||||||
Sbjct: 230 caccgtggaagctcctctctctatctaaccaacttagaaactaatgtactagggctgc 173
>BF01021A2B11
Length = 729
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 980 acccaggtgtaggtttaaggggtccctatccaacgagcgttaaacgctcacccccaccat 1039
||||||||||||||| |||| | ||| ||| ||| |||||||||||||||| ||||| |
Sbjct: 446 acccaggtgtaggttgaaggcgccccgatctaacacgcgttaaacgctcacctccaccgt 387
Query: 1040 ccaagctcctctct 1053
||||||||||||||
Sbjct: 386 ccaagctcctctct 373
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 168,569
Number of extensions: 3501
Number of successful extensions: 3501
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 3496
Number of HSP's successfully gapped: 10
Length of query: 1491
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1474
Effective length of database: 8,119,229
Effective search space: 11967743546
Effective search space used: 11967743546
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)