BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07683 (UTR included)
(1474 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A2C11 833 0.0
>BF01054A2C11
Length = 779
Score = 833 bits (420), Expect = 0.0
Identities = 467/485 (96%), Gaps = 12/485 (2%)
Strand = Plus / Plus
Query: 488 cgcgcatccaacaatgttctcattaaaccgagttg------------gcagtaagatttt 535
||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 cgcgcatccaacaatgttctcattaaaccgagttggcagtaaggttggcagtaagatttt 60
Query: 536 aaagcaatggcgaacgccggcagccgctgtatcacagacgcaaaagaatttcagctccga 595
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 61 aaagcaatggcgaacgccggcagccgctgtttcgcagacgcaaaagaatttcagctccga 120
Query: 596 agctccgagaccactttcggtattgacagaggatgaattggccatgaaggacacaataag 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctccgagaccactttcggtattgacagaggatgaattggccatgaaggacacaataag 180
Query: 656 gaaactagctacggaacaaatagcaccattagttaaaaagatggaagacgaacacaaaat 715
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaactagctacggaacaaatagcgccattagttaaaaagatggaagacgaacacaaaat 240
Query: 716 tgacgaaaccgtcagacaaatgctcttcgataatgggttaatgggcattgagacgccagt 775
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgacgaaaccgttagacaaatgctcttcgataatgggttaatgggcattgagacgccagt 300
Query: 776 ggagtacagcgggtcgggttgcgggttcctgaccatgatgttggttgttgaggaactgtc 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggagtacagcgggtcgggttgcgggttcctgaccatgatgttggttgttgaggaactgtc 360
Query: 836 gagggtggatccagctgtcgcagcgtacgtcgacattcacaacacactcgtaaattcgct 895
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagggtggacccagctgtggcagcgtacgtcgacattcacaacacactcgtaaattcgct 420
Query: 896 attcatgaaattgggcaccgaagaacagaagaagaaatatttgactaacctctgcaccaa 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attcatgaaattgggcaccgaagaacagaagaagaaatatttgactaacctctgcaccaa 480
Query: 956 atacg 960
|||||
Sbjct: 481 atacg 485
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 237,093
Number of extensions: 5935
Number of successful extensions: 5935
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5935
Number of HSP's successfully gapped: 2
Length of query: 1474
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1457
Effective length of database: 8,119,229
Effective search space: 11829716653
Effective search space used: 11829716653
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)