BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07703 (UTR included)
(2182 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B1B02 1566 0.0
BF14_270_C1 224 5e-58
>BF01022B1B02
Length = 806
Score = 1566 bits (790), Expect = 0.0
Identities = 802/806 (99%)
Strand = Plus / Plus
Query: 1130 cgagaacgtggacatatggtccgtgggctgcatcatgggggagatgatacgaggaggagt 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgagaacgtggacatatggtccgtgggctgcatcatgggggagatgatacgaggaggagt 60
Query: 1190 cctgttcccggggacggaccacatcgaccagtggaataaaatcatagagcaactgggcac 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctgttcccggggacggaccacatcgaccagtggaataaaatcatagagcaactgggcac 120
Query: 1250 tccgtcggccgcgttcatgtcacgtctgcagccgaccgtccgcaactacgtggagaacag 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccgtcggccgcgttcatgtcacgtctgcagccgaccgtccgcaactacgtggagaacag 180
Query: 1310 acctcgctacacgggctacagcttcgagcgcctgttcccggacatcctgttcccgtcgga 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acctcgctacacgggctacagcttcgagcgcctgttcccggacatcctgttcccgtcgga 240
Query: 1370 ctccaacgagcacaaccgactcaaggcctcccaggcgagggacctcctgtcccgcatgct 1429
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcaaacgagcacaaccgactcaaggcctcccaggcgagggacctcctgtcccgcatgct 300
Query: 1430 ggtcatcgaccccgagagacgcatctcggtggacgaggcgctgctccacccctacatcaa 1489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtcatcgaccccgagagacgcatctcggtggacgaggcgctgctccacccctacatcaa 360
Query: 1490 cgtgtggtacgacgagggagaggtcaacgcgccggcccccgcctcgtacgaccactcggt 1549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgtgtggtacgacgagggagaggtcaacgcgccggcccccgcctcgtacgaccactcggt 420
Query: 1550 ggacgagcgggaacacactgtggagcaatggaagcagctcatctaccaggaggtggtgga 1609
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggacgagcgggaacacaccgtggagcaatggaagcagctcatctaccaggaggtggtgga 480
Query: 1610 gtacgccgcgcctccgcccccggcacacctgcagcccccgccggaccacgcgcagcccgc 1669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtacgccgcgcctccgcccccggcacacctgcagcccccgccggaccacgcgcagcccgc 540
Query: 1670 cctcaccacataggtgaggacgagcaacaccgcggacggatactgaataaagataacaac 1729
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 541 cctcaccacataggtgaggacgaggaacaccgcggacggatactgaataaagacaacaac 600
Query: 1730 tgatgcccccctccccctccataggtcccggccccgctggccgccgctcccgcagccggc 1789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgatgcccccctccccctccataggtcccggccccgctggccgccgctcccgcagccggc 660
Query: 1790 ggtcggacgacggactgatgtacatatatataactgtcgcgcgacagccgggccgacgcc 1849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggtcggacgacggactgatgtacatatatataactgtcgcgcgacagccgggccgacgcc 720
Query: 1850 gggtcgacgtcgggtcggtgtcgtgtcggcgacgtgtcgccgtcgtcccgcgggtgtcac 1909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gggtcgacgtcgggtcggtgtcgtgtcggcgacgtgtcgccgtcgtcccgcgggtgtcac 780
Query: 1910 gtggtggatgtgatctcgtgtattga 1935
||||||||||||||||||||||||||
Sbjct: 781 gtggtggatgtgatctcgtgtattga 806
>BF14_270_C1
Length = 1580
Score = 224 bits (113), Expect = 5e-58
Identities = 132/137 (96%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 2047 gtgttgctcgtctcatctcagatgcttctcccgccacgatgcctgtggatgtcgctgtat 2106
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtgttgctcgtctcatctcacatgcttctcccgccacgatgcctgtggatgtcgctgtat 61
Query: 2107 ggtcgagcccgtttc-ttttgcgtcgaggagtgcctttagcaaattggtaactattcgtg 2165
||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 62 ggtcgagcccgtttcgttttgcgtccaggagtgcctttagcaaattgataactattcgtg 121
Query: 2166 atgtaaaataaatacgg 2182
|| ||||||||||||||
Sbjct: 122 atttaaaataaatacgg 138
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 220,435
Number of extensions: 5317
Number of successful extensions: 5317
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5314
Number of HSP's successfully gapped: 2
Length of query: 2182
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2165
Effective length of database: 8,119,229
Effective search space: 17578130785
Effective search space used: 17578130785
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)