BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07727 (UTR included)
(1352 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3012_C1 593 e-169
>BF14_3012_C1
Length = 1013
Score = 593 bits (299), Expect = e-169
Identities = 311/315 (98%)
Strand = Plus / Plus
Query: 547 aaggagctggtgcttccactgttatcggatatgaatttcgttcaggaactgtgcgatgaa 606
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aaggagctggtgcttccacttttatcggatatgaatttcgttcaggaactgtgcgatgaa 424
Query: 607 ttacacatactgttcaaacaagacaaaggcttcgacaaaggtctcttcgagcgacagatg 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttacacatactgttcaaacaagacaaaggcttcgacaaaggtctcttcgagcgacagatg 484
Query: 667 tctgtgatgcgaggtcaagtgctgaacctcacgcaggcgctcaaagacaacaagagtccc 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tctgtgatgcgaggtcaagtgctgaacctcacgcaggcgctcaaagacaacaagagtccc 544
Query: 727 gtgcagctcgtgcagatgccggctgtcatagttgagaggtctaagagcgggtcgacctcg 786
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 545 gtgcagctcgtgcagatgccggctgttatagttgaaaggtctaagagcgggtcgacctcg 604
Query: 787 tcccgtttcttcgactcgttccagcaacggttccagcacaagtcgcctttcttctcctgg 846
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tctcgtttcttcgactcgttccagcaacggttccagcacaagtcgcctttcttctcctgg 664
Query: 847 tggtgacgtcacggt 861
|||||||||||||||
Sbjct: 665 tggtgacgtcacggt 679
Score = 377 bits (190), Expect = e-104
Identities = 208/213 (97%), Gaps = 2/213 (0%)
Strand = Plus / Plus
Query: 1140 ggttataaaagtgtaatgttatacagatcacacgtatgtaggttattgtacactccgctg 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ggttataaaagtgtaatgttatacagatcacacgtatgtaggttattgtacactccgctg 736
Query: 1200 aagttgacctgagacattgtttgtatggagttcgaaattcaataaccggtttgaatcaat 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aagttgacctgagacattgtttgtatggagttcgaaattcaataaccggtttgaatcaat 796
Query: 1260 gtgaaataattaaatgaatatgtaaagtttttttttttttgtaaatatgtttgtgaaaca 1319
|||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 797 gtgaaataatgaaatgaatatgtaaag--tttttttttttgtaaatatgtttgtgaaaca 854
Query: 1320 cattttctaatctatcgtgttatatattaattc 1352
|||||| |||||||||||||||| |||||||||
Sbjct: 855 cattttttaatctatcgtgttatgtattaattc 887
Score = 178 bits (90), Expect = 2e-44
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 450 gatgggttcgttccaactgtttgttgagggttacaaagatgccgactactggttgaggag 509
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gatgggttcgttccaactgtttgttgagggttannnagatgccgactactggttgaggag 60
Query: 510 attcgaacaggagcctcccccggcccacctcatgaccaa 548
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcgaacaggagcctcccccggcccacctcatgaccaa 99
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 198,053
Number of extensions: 18009
Number of successful extensions: 18009
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 18008
Number of HSP's successfully gapped: 3
Length of query: 1352
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1335
Effective length of database: 8,119,229
Effective search space: 10839170715
Effective search space used: 10839170715
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)