BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07733 (UTR included)
(2344 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B1D02 137 9e-32
BF01023A2A12 135 4e-31
BF01031B1E12 94 1e-18
BF01052B1H02 92 5e-18
BF01040A1G09 80 2e-14
BF01037B1H08 80 2e-14
BF01062A1A05 70 2e-11
>BF01056B1D02
Length = 778
Score = 137 bits (69), Expect = 9e-32
Identities = 201/238 (84%), Gaps = 9/238 (3%)
Strand = Plus / Minus
Query: 144 atcatcagcttatcggtgcccattgctgagcaaaggcctctcctcacacggagaaatgtt 203
||||||||| |||||| ||||| |||||||||||||||||| |||||| | || |||
Sbjct: 737 atcatcagcctatcggagcccactgctgagcaaaggcctcttctcacatgaag----gtt 682
Query: 204 agagcattaatcaccaagcttgcacaaggcggattggcgatttcaaacttataatttgaa 263
|||||||||| ||||| |||||| |||| ||| ||||||||||||| |||||||||||||
Sbjct: 681 agagcattaaccaccacgcttgctcaagacgggttggcgatttcaatcttataatttgaa 622
Query: 264 attataaagtccgtgtttcctcacgatgtttattttttaccgtctgtctgtgtctaaata 323
||||| ||| || |||||||||||| |||| | || |||||| || |||||||| ||
Sbjct: 621 attat-aagaccaggtttcctcacgacgttt-tccttcaccgtcagt-ggtgtctaacta 565
Query: 324 ctcttaggaattaaatataactcgg-aaatatcacattggtacttgccaaggtttcaa 380
| ||||| || || |||| |||||| ||| |||||||||||||||||| |||||||||
Sbjct: 564 cccttagaaagtacatatgactcggaaaagatcacattggtacttgcc-aggtttcaa 508
>BF01023A2A12
Length = 723
Score = 135 bits (68), Expect = 4e-31
Identities = 114/128 (89%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 143 catcatcagcttatcggtgcccattgctgagcaaaggcctctcctcacacggagaaatgt 202
|||||||||| |||||| || || |||||||||||||||||| ||||| |||||| ||
Sbjct: 340 catcatcagcctatcggagctcactgctgagcaaaggcctcttatcacatggagaag-gt 282
Query: 203 tagagcattaatcaccaagcttgcacaaggcggattggcgatttcaaacttataatttga 262
||||||||||||||||| ||| || |||||| |||||| |||||||||||||||||||||
Sbjct: 281 tagagcattaatcaccacgctcgctcaaggctgattggtgatttcaaacttataatttga 222
Query: 263 aattataa 270
||||||||
Sbjct: 221 aattataa 214
>BF01031B1E12
Length = 730
Score = 93.7 bits (47), Expect = 1e-18
Identities = 103/119 (86%), Gaps = 2/119 (1%)
Strand = Plus / Minus
Query: 143 catcatcagcttatcggtgcccattgctgagcaaaggcctctcctcacacggagaaatgt 202
|||||| ||| |||||| ||||| ||||||||||| || || ||||||||||||| ||
Sbjct: 213 catcataagcctatcggagcccactgctgagcaaatccc-cttctcacacggagaag-gt 156
Query: 203 tagagcattaatcaccaagcttgcacaaggcggattggcgatttcaaacttataatttg 261
||||||||||||||||| |||||| |||| ||| ||||||||||||| |||||| ||||
Sbjct: 155 tagagcattaatcaccacgcttgctcaagacgggttggcgatttcaatcttatactttg 97
>BF01052B1H02
Length = 790
Score = 91.7 bits (46), Expect = 5e-18
Identities = 114/134 (85%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 161 gcccattgctgagcaaaggcctctcctcacacggagaaatgttagagcattaatcaccaa 220
||||| || |||||||| |||| | ||| || ||||||| ||||||||||||| |||||
Sbjct: 289 gcccactgttgagcaaacgccttttctcccatggagaaa-gttagagcattaagcaccac 347
Query: 221 gcttgcacaaggcggattggcgatttcaaacttataatttgaaattataaagtccgtgtt 280
|||||| |||| ||| |||||||||||||||| || |||| ||||||| ||| || |||
Sbjct: 348 gcttgctcaagacgggttggcgatttcaaactaattatttcaaattat-aagaccaggtt 406
Query: 281 tcctcacgatgttt 294
||||||||||||||
Sbjct: 407 tcctcacgatgttt 420
>BF01040A1G09
Length = 753
Score = 79.8 bits (40), Expect = 2e-14
Identities = 104/124 (83%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 143 catcatcagcttatcggtgcccattgctgagcaaaggcctctcctcacacggagaaatgt 202
|||||||||| |||||| ||| ||||||||| | |||||| ||| || |||||| |
Sbjct: 132 catcatcagcctatcggaagccactgctgagcataagcctcttctcgcatggagaaggtt 73
Query: 203 tagagcattaatcaccaagcttgcacaaggcggattggcgatttcaaacttataatttga 262
|| |||||||||| ||| |||||| |||| || ||||||||||||||||||||||||||
Sbjct: 72 ta-agcattaatcgccacgcttgctcaagatgggttggcgatttcaaacttataatttga 14
Query: 263 aatt 266
||||
Sbjct: 13 aatt 10
>BF01037B1H08
Length = 758
Score = 79.8 bits (40), Expect = 2e-14
Identities = 89/104 (85%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 146 catcagcttatcggtgcccattgctgagcaaaggcctctcctcacacggagaaatgttag 205
||||||| |||||| ||||| ||||||||||||||||| |||||| | || || |||||
Sbjct: 341 catcagcctatcggagcccacagctgagcaaaggcctcttctcacatgtag-aaggttag 283
Query: 206 agcattaatcaccaagcttgcacaaggcggattggcgatttcaa 249
|||||||| ||||| |||||| |||| ||| ||||||||||||
Sbjct: 282 agcattaagcaccacgcttgctcaagacggggtggcgatttcaa 239
>BF01062A1A05
Length = 777
Score = 69.9 bits (35), Expect = 2e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 161 gcccattgctgagcaaaggcctctcctcacacggagaaatgttagagcattaatcaccaa 220
||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||
Sbjct: 583 gcccactgctaagcaaaggcctcttctcacaaggagaag-gttagagcattaatcaccac 525
Query: 221 gcttgcacaag 231
|||||| ||||
Sbjct: 524 gcttgctcaag 514
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 336,210
Number of extensions: 8546
Number of successful extensions: 8546
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 8540
Number of HSP's successfully gapped: 7
Length of query: 2344
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2327
Effective length of database: 8,119,229
Effective search space: 18893445883
Effective search space used: 18893445883
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)