BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07776 (UTR included)
(4840 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B2F03 1548 0.0
BF01061A1A09 92 1e-17
>BF01062B2F03
Length = 839
Score = 1548 bits (781), Expect = 0.0
Identities = 802/809 (99%)
Strand = Plus / Plus
Query: 3654 cggcaggatagaggtccggggcctaacctgggcgggcccgggggacctgggggtccgcgc 3713
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 31 cggcaggatagaggtccggggcctaacctgggtgggcccgggggacctgggggtccgcgt 90
Query: 3714 gggcctcctggggaccgtttccagagagaccacagaccccagaacagaggaccccctcat 3773
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gggcctcccggggaccgtttccagagagaccacagaccccagaacagaggaccccctcat 150
Query: 3774 caacctgataagagaccggcagggccgcctcctggttcatggcagcgaggttccgggcca 3833
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 151 caacctgataagagaccggcagggccgcctcctggttcatggcaacgaggttccgggcca 210
Query: 3834 cgtggcggaggtcacatggggcatggaccaagacaggataaccagaaccaaagccagaat 3893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 cgtggcggaggtcacatggggcatggaccaagacaggataaccagaaccaaagccagaat 270
Query: 3894 cacagccaaaaccaaaaccagcagtggaaccagtgggccggtaactggggaggctggggt 3953
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cactgccaaaaccaaaaccagcagtggaaccagtgggccggtaactggggaggctggggt 330
Query: 3954 aactggaataatcaaaatccaggatggaacaactggaataattggtgctggggcaaccag 4013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aactggaataatcaaaatccaggatggaacaactggaataattggtgctggggcaaccag 390
Query: 4014 aactccggccaggggcagggacaggtacaggggcagggtccagccgggaagggaccttca 4073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aactccggccaggggcagggacaggtacaggggcagggtccagccgggaagggaccttca 450
Query: 4074 ggacaggtacaggcacaggcggggcaggggcagggacaaggacagggccagggtcagggt 4133
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 451 ggacaggtacaggcacaggcggggcaggggcagggacaagggcagggccagggtcagggt 510
Query: 4134 cagggctggcagaactacaatgcacagcaatggttccagtggcagcagtggcagcaacag 4193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 cagggctggcagaactacaatgcacagcaatggttccagtggcagcagtggcagcaacag 570
Query: 4194 aactggcccgggtacggtcagcaacaacaacaacagcaacaaggcggcgccaacagcgga 4253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aactggcccgggtacggtcagcaacaacaacaacagcaacaaggcggcgccaacagcgga 630
Query: 4254 gataacgctcaggcgtgggcacagttctatcagaactacggcgccggcaacaacgggaac 4313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gataacgctcaggcgtgggcacagttctatcagaactacggcgccggcaacaacgggaac 690
Query: 4314 tccaacccggccttggaaaagaagtgatgacgtcaccaccacacaacacaatggcgacgc 4373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tccaacccggccttggaaaagaagtgatgacgtcaccaccacacaacacaatggcgacgc 750
Query: 4374 acacactcacacacacacacacacagctgacagtttatatacataggtagtttacagacg 4433
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 acacactcacactcacacacacacagctgacagtttatatacataggtagtttacagacg 810
Query: 4434 gaattacagtaattataattatatagaat 4462
|||||||||||||||||||||||||||||
Sbjct: 811 gaattacagtaattataattatatagaat 839
>BF01061A1A09
Length = 586
Score = 91.7 bits (46), Expect = 1e-17
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 1836 ctcccctcattccccttcctaacctctttccccccttctctatcttttcc 1885
|||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 586 ctcccctcattcccctccctaacctctttccccccttctctatcttttcc 537
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 449,764
Number of extensions: 10101
Number of successful extensions: 10101
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10090
Number of HSP's successfully gapped: 2
Length of query: 4840
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4822
Effective length of database: 8,109,745
Effective search space: 39105190390
Effective search space used: 39105190390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)