BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07794 (UTR included)
(2374 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2173_C1 1374 0.0
>BF14_2173_C1
Length = 724
Score = 1374 bits (693), Expect = 0.0
Identities = 715/723 (98%)
Strand = Plus / Plus
Query: 384 ttaaaaatatgttacgatgaaagttatagttttatttattatttactgatgtcttagaag 443
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttaaaaatatgttgcgatgaaagttatagttttatttattatttactgatgtcttagaag 61
Query: 444 cagttagacaatttaacaataaaaaagtgtacatcttgtataaatatttatttaaaaatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cagttagacaatttaacaataaaaaagtgtacatcttgtataaatatttatttaaaaatg 121
Query: 504 cctgtactatgcaaagcaggatgtggaaaaaatgctatgttaaagcgtcctaaaacgggg 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cctgtactatgcaaagcaggatgtggaaaaaatgctatgttaaagcgtcctaaaacgggg 181
Query: 564 gatactctatgtaaagaatgcttttacgaagcctttgaaacagaaatccattttacaata 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gatactctatgtaaagaatgcttttacgaagcctttgaaacagaaatccattttacaata 241
Query: 624 acaaaagcagaattatttaatagaggagattctgtcgccatcgccgcctctggtggcaag 683
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acaaaagcagaactatttaatagaggagattctgtcgccatcgccgcctctggtggcaag 301
Query: 684 gattcaaccgtattggcacatgtacttaaaacattaaatcaaagatatgactatggactt 743
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 302 gattcaaccggattggcacatgtacttaaaacattaaatcaaagatatgactacggactt 361
Query: 744 aatcttatgttgctgtccatagacgagggcataaccggctacagagatgacagcttggaa 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aatcttatgttgctgtccatagacgagggcataaccggctacagagatgacagcttggaa 421
Query: 804 acagtcaaacaaaacagagatgattacgagatgaatctcaaaatattatcatataaagat 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 acagtcaaacaaaacagagatgattacgagatgaatctcaaaatattatcatataaagat 481
Query: 864 ttatatggttggaccatggacgaaattgtagcccaaatcggaagaaagaataattgtaca 923
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 482 ttatatggttggaccatggacgaaattgtagcccaaatcggaagaaagaataattgcaca 541
Query: 924 ttctgtggagtattcaggaggcaagctttggatagaggtgccgccatgcttaatgtgaaa 983
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 542 ttctgtggagtattcaggaggcaagctttggatagaggtgccgccatgcttaacgtgaaa 601
Query: 984 tgtatagcaacaggacacaatgctgatgacatagcagagacggtgctgatgaatgtgctg 1043
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 602 tgtatagcaacaggacacaatgctgatgacatagcagagacggnnctgatgaatgtgctg 661
Query: 1044 agaggagacatagctcggctcaagagatgcactgctatatctactggcagcgagggcaca 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agaggagacatagctcggctcaagagatgcactgctatatctactggcagcgagggcaca 721
Query: 1104 att 1106
|||
Sbjct: 722 att 724
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 315,775
Number of extensions: 7638
Number of successful extensions: 7638
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7638
Number of HSP's successfully gapped: 1
Length of query: 2374
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2357
Effective length of database: 8,119,229
Effective search space: 19137022753
Effective search space used: 19137022753
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)