BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07796 (UTR included)
(2032 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A2D11 1403 0.0
>BF01030A2D11
Length = 744
Score = 1403 bits (708), Expect = 0.0
Identities = 727/734 (99%)
Strand = Plus / Plus
Query: 422 atttgagaagaatgttagataatttgtaatatggttagaagatctatgatattctcttgt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 atttgagaagaatgttagataatttgtaatatggttagaagatctatgatattctcttgt 70
Query: 482 gaaatttaagctgacaaaaatggatttcttatcagagatcattggtgaaacagtgattct 541
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 aaaatttaagctgataaaaatggatttcttatcagagatcattggtgaaacagtgattct 130
Query: 542 aggcatagattcccttattttgggtttttgtgtgaaacaacttagtaaatgtaaacatat 601
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 131 aggcatagattcccttattttgggtttttgtgtgaaacaactaagtaaatgtaaacatat 190
Query: 602 ccttgattcactacagtcagctccagttttggatatagattctaccataaccaaggaaat 661
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 191 ccttgattcactacagtcagctccagttttggatatagattccaccataaccaaggaaat 250
Query: 662 aaaaaaatatccaaatgatgtgattccctatgttgttgtaaggggtttggttaaacctct 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aaaaaaatatccaaatgatgtgattccctatgttgttgtaaggggtttggttaaacctct 310
Query: 722 cggtaaccccataactagcaactataatcaactggtcacaggtgttatacaaagattaac 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cggtaaccccataactagcaactataatcaactggtcacaggtgttatacaaagattaac 370
Query: 782 aataaaagagcatgttatagcacggacatcagcgggcttctggtccgatcaaacccgcac 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aataaaagagcatgttatagcacggacatcagcgggcttctggtccgatcaaacccgcac 430
Query: 842 tatacatgaggtatgcaacgctacaccatttgttttgagtaacgggaaatatagtattga 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tatacatgaggtatgcaacgctacaccatttgttttgagtaacgggaaatatagtattga 490
Query: 902 agtagtggatgcattgtccgctgagcttttagatctagatgttataactgataaatttga 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agtagtggatgcattgtccgctgagcttttagatctagatgttataactgataaatttga 550
Query: 962 acccatgtcgcccggtgtaatcgatcatgtatggggtttcttctcgggggtccgtcagag 1021
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 acccatgtcacccggtgtaatcgatcatgtatggggtttcttctcgggggtccgtcagag 610
Query: 1022 aggactacagactatggaggaaatgttgagagatggctcctatataactgttatcggtga 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aggactacagactatggaggaaatgttgagagatggctcctatataactgttatcggtga 670
Query: 1082 actgagtaaaaccaattcaggcttaaagatccagccaccacgggatggtctaccattgta 1141
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 671 actgagtaaaaccaattcanncttaaagatccagccaccacgggatggtctaccattgta 730
Query: 1142 cctcactacttcca 1155
||||||||||||||
Sbjct: 731 cctcactacttcca 744
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 247,120
Number of extensions: 5146
Number of successful extensions: 5146
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5146
Number of HSP's successfully gapped: 1
Length of query: 2032
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2015
Effective length of database: 8,119,229
Effective search space: 16360246435
Effective search space used: 16360246435
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)