BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07824 (UTR included)
(2659 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_177_C1 1643 0.0
>BF14_177_C1
Length = 874
Score = 1643 bits (829), Expect = 0.0
Identities = 835/837 (99%)
Strand = Plus / Plus
Query: 1562 cgacaaaatgggtggtggatccctgaccgctctccccgtcatcgagacccaggctggtga 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 cgacaaaatgggtggtggatccctgaccgctctccccgtcatcgagacccaggctggtga 70
Query: 1622 tgtatcagcttacattcccaccaacgtgatctctatcactgatggacaaatcttcttgga 1681
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 71 tgtatcagcttacattcccaccaacgtgatctctatcactgacggacaaatcttcttgga 130
Query: 1682 aactgagctgttctacaagggtatccgtccagccatcaacgtcggtctgtctgtgtcccg 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aactgagctgttctacaagggtatccgtccagccatcaacgtcggtctgtctgtgtcccg 190
Query: 1742 cgtaggttccgctgctcagaccaaggctatgaaacaggtggccggttccatgaaactgga 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cgtaggttccgctgctcagaccaaggctatgaaacaggtggccggttccatgaaactgga 250
Query: 1802 attggctcaataccgtgaggtagccgcgttcgcccaattcggctcagacttggatgccgc 1861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 attggctcaataccgtgaggtagccgcgttcgcccaattcggctcagacttggatgccgc 310
Query: 1862 cacccagcagttgttgaaccgtggtatgcgtcttactgagctgctcaaacagggccagta 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cacccagcagttgttgaaccgtggtatgcgtcttactgagctgctcaaacagggccagta 370
Query: 1922 cgtgccaatggccattgaagaacaggttgccattatctactgtggtgtgcgtggacatct 1981
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 371 cgtgccaatggccattgaagaacaggttgccattatctactgcggtgtgcgtggacatct 430
Query: 1982 tgacaagttggacccaaccaagatcactgccttcgaaaaggaattcacccagcacatcaa 2041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tgacaagttggacccaaccaagatcactgccttcgaaaaggaattcacccagcacatcaa 490
Query: 2042 aaccagccaccagggtctgctcaacaccatcgccaaggacggacagatcacccccgaatc 2101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aaccagccaccagggtctgctcaacaccatcgccaaggacggacagatcacccccgaatc 550
Query: 2102 tgacgcctcattgaagaagatcgtctcagacttccttgctaccttccaagcacaataaag 2161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tgacgcctcattgaagaagatcgtctcagacttccttgctaccttccaagcacaataaag 610
Query: 2162 tacttggtagttgccactttagattgtacacgcaattccagtgcccattgttacaatcta 2221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tacttggtagttgccactttagattgtacacgcaattccagtgcccattgttacaatcta 670
Query: 2222 gtacagtataagtgaccactgacagaagcattccgcccacatgcttgtatgtttctgtca 2281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gtacagtataagtgaccactgacagaagcattccgcccacatgcttgtatgtttctgtca 730
Query: 2282 gaggtctagtagtgtgtcattcgtatggactgtattgtaagtgaatacaatcatggaatg 2341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gaggtctagtagtgtgtcattcgtatggactgtattgtaagtgaatacaatcatggaatg 790
Query: 2342 tatttatctcttggagtcagcagtggttatatataaatattaaaattattaatcaaa 2398
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tatttatctcttggagtcagcagtggttatatataaatattaaaattattaatcaaa 847
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 277,446
Number of extensions: 6312
Number of successful extensions: 6312
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6312
Number of HSP's successfully gapped: 1
Length of query: 2659
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2642
Effective length of database: 8,119,229
Effective search space: 21451003018
Effective search space used: 21451003018
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)