BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07871 (UTR included)
(1372 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2543_C1 414 e-115
BF14_1645_C1 113 8e-25
BF14_2430_C1 105 2e-22
BF14_1695_C1 105 2e-22
BF01025B1E11 100 1e-20
BF01051A1D12 92 3e-18
>BF14_2543_C1
Length = 1762
Score = 414 bits (209), Expect = e-115
Identities = 209/209 (100%)
Strand = Plus / Minus
Query: 1141 tattagtcagaatttaaaatatataatatactttattgaaaataagtagttcatttgtaa 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1742 tattagtcagaatttaaaatatataatatactttattgaaaataagtagttcatttgtaa 1683
Query: 1201 tgacaaatagtttattatcttggtgctgtatttatccattgcggggaagacacttgcaat 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1682 tgacaaatagtttattatcttggtgctgtatttatccattgcggggaagacacttgcaat 1623
Query: 1261 tcaattcttttcacagttattaattcatcgtcggcctcatgaatgttgtagaatctttcc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1622 tcaattcttttcacagttattaattcatcgtcggcctcatgaatgttgtagaatctttcc 1563
Query: 1321 aattcttcaatggctttatcttctaactg 1349
|||||||||||||||||||||||||||||
Sbjct: 1562 aattcttcaatggctttatcttctaactg 1534
>BF14_1645_C1
Length = 793
Score = 113 bits (57), Expect = 8e-25
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 81 aaagtcaatcccggatcgtgtctcctctattctacatgacactggcagaatatactgtgc 140
||||| |||||||||||||| |||||| |||||||| |||||||||||||||||||||||
Sbjct: 94 aaagttaatcccggatcgtgcctcctccattctacacgacactggcagaatatactgtgc 153
Query: 141 acgtctttgcacggacgaaggctacattataaaaaaa 177
||||||| |||||| |||||| | | ||||||||||
Sbjct: 154 acgtcttggcacgggtgaaggccataatataaaaaaa 190
>BF14_2430_C1
Length = 830
Score = 105 bits (53), Expect = 2e-22
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 82 aagtcaatcccggatcgtgtctcctctattctacatgacactggcagaatatactgtgca 141
|||| ||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 145 aagttaatcccggatcgtgtttcctccattctacacgacactggcagaatatactgtgca 204
Query: 142 cgtctttgcacggacgaaggc 162
| |||||||||| | ||||||
Sbjct: 205 catctttgcacgtatgaaggc 225
>BF14_1695_C1
Length = 1407
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 109 attctacatgacactggcagaatatactgtgcacgtctttgcacggacgaaggctacatt 168
||||||||||||||||||||||||||||||||||||||||||||||| ||| || | |||
Sbjct: 1179 attctacatgacactggcagaatatactgtgcacgtctttgcacggatgaatgccatatt 1238
Query: 169 ataaaaaaa 177
|||||||||
Sbjct: 1239 ataaaaaaa 1247
>BF01025B1E11
Length = 786
Score = 99.6 bits (50), Expect = 1e-20
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 81 aaagtcaatcccggatcgtgtctcctctattctacatgacactggcagaatatactgtgc 140
||||| ||||||||||||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 180 aaagttaatcccggatcgtgtttcctccattctacacgatactggcagaatatattgtgc 239
Query: 141 acgtctttgcacggacgaaggc 162
||||| ||||||||| ||||||
Sbjct: 240 acgtccttgcacggatgaaggc 261
>BF01051A1D12
Length = 812
Score = 91.7 bits (46), Expect = 3e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 77 tttcaaagtcaatcccggatcgtgtctcctctattctacatgacactggcagaatatact 136
|||| |||| ||||||||||||||||| ||||| ||||| ||||||||||||||| |||
Sbjct: 201 tttctaagttaatcccggatcgtgtctaatctatgctacacgacactggcagaatagact 260
Query: 137 gtgcacgtctttgcacggacgaaggc 162
|| |||||| ||||||||| ||||||
Sbjct: 261 gtacacgtccttgcacggatgaaggc 286
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 219,584
Number of extensions: 5233
Number of successful extensions: 5233
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 5233
Number of HSP's successfully gapped: 6
Length of query: 1372
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1355
Effective length of database: 8,119,229
Effective search space: 11001555295
Effective search space used: 11001555295
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)