BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07883 (UTR included)
(2641 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A2C09 1451 0.0
>BF01049A2C09
Length = 752
Score = 1451 bits (732), Expect = 0.0
Identities = 746/752 (99%)
Strand = Plus / Plus
Query: 930 tggcttcgctatttagaaaatcacatatctgggaacagaaacagtgagacgccgtggcag 989
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 tggcttcgctatttagaaaatcacatatctggtaacagaaacagtgagacgccgtggcag 60
Query: 990 cagcggatagaaccggccctgttgcaggacacgaacatctggtcggccaacaacaccttc 1049
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 cagcggatagaaccggccctgttgcaggatacgaacatctggtcggccaacaacaccttc 120
Query: 1050 cgccgcaccatcggcaagaacgtggacttccgggggatgttggactcgttggagcacgcg 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgccgcaccatcggcaagaacgtggacttccgggggatgttggactcgttggagcacgcg 180
Query: 1110 gcctacacggacgtgttgcaggagtccttctccaagaacggcagggacgtggatatcggc 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcctacacggacgtgttgcaggagtccttctccaagaacggcagggacgtggatatcggc 240
Query: 1170 ctggacggagacgccgcccactacgaggcgcagaccaagtcacaccggtctaatagtctc 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggacggagacgccgcccactacgaggcgcagaccaagtcacaccggtctaatagtctc 300
Query: 1230 acgccgccctccaccaacttcatgcagatgtcctcctcggccgagaacctcagcgacgag 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acgccgccctccaccaacttcatgcagatgtcctcctcggccgagaacctcagcgacgag 360
Query: 1290 ccgttcgtccagaaaccgaggagcttctcgctatccagcgagcacagtctgactcagctg 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccgttcgtccagaaaccgaggagcttctcgctatccagcgagcacagtctgactcagctg 420
Query: 1350 cggcccataggggtgacgtatggaaccaccggcagcgagacaaggctggatgacctccgg 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggcccataggggtgacgtatggaaccaccggcagcgagacaaggctggatgacctccgg 480
Query: 1410 accaacaattttgcggaacatcccggcatgtccaccgtggggcagtggctcaagagtctc 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accaacaattttgcggaacatcccggcatgtccaccgtggggcagtggctcaagagtctc 540
Query: 1470 cggctgcacaagtacgtgtggctcttcaccaacatcacctacgagcagatgatggccatg 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cggctgcacaagtacgtgtggctcttcaccaacatcacctacgagcagatgatggccatg 600
Query: 1530 gacgacaagtacctggagaaactgggtgtgacgaagggcgcgcgtcacaagatcctgctg 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gacgacaagtacctggagaaactgggtgtgacgaagggcgcgcgtcacaagatcctgctg 660
Query: 1590 tcgatcgctcgtctgtcggagcggccgtctatcttggagtcggttcggagtgagctgtct 1649
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 661 tcgatcgctcgtctgtcggnncggccgtctatcttggagtcggttcggnntgagctgtct 720
Query: 1650 tcaggccgggtgtgcagagctctggaccgtct 1681
||||||||||||||||||||||||||||||||
Sbjct: 721 tcaggccgggtgtgcagagctctggaccgtct 752
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 233,383
Number of extensions: 8937
Number of successful extensions: 8937
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8937
Number of HSP's successfully gapped: 1
Length of query: 2641
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2624
Effective length of database: 8,119,229
Effective search space: 21304856896
Effective search space used: 21304856896
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)