BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07944 (UTR included)
(2710 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046A2H09 1302 0.0
>BF01046A2H09
Length = 790
Score = 1302 bits (657), Expect = 0.0
Identities = 660/661 (99%)
Strand = Plus / Plus
Query: 397 acaggaatatggattcaagctgttctacatttaccgatgtttcgagtgaccactctaaga 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 acaggaatatggattcaagctgttctacatttaccgatgtttcgagtgaccactctaaga 189
Query: 457 gtataatacacatagacgtggattgtttttacgctcaagtagagatggtgcagaaaccag 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gtataatacacatagacgtggattgtttttacgctcaagtagagatggtgcagaaaccag 249
Query: 517 aactgcgctgttttccgctaggaatccaacagaaaaacatcgttgtaaccagtaattatg 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aactgcgctgttttccgctaggaatccaacagaaaaacatcgttgtaaccagtaattatg 309
Query: 577 aagccaggaagtacggtatacgaaagtgcatgctcgtgtctgatgctttaaaagtatgtc 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aagccaggaagtacggtatacgaaagtgcatgctcgtgtctgatgctttaaaagtatgtc 369
Query: 637 cgaatttaaaacttattaacggcgaagacttacatgattatagagcggcgtccaataaaa 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cgaatttaaaacttattaacggcgaagacttacatgattatagagcggcgtccaataaaa 429
Query: 697 tatttacagttttacaaacgtttaagtgtccagtggagaagttaggaatggatgaaaatt 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tatttacagttttacaaacgtttaagtgtccagtggagaagttaggaatggatgaaaatt 489
Query: 757 ttattgatgtcacaaatatagtacaagaaagaataaaaaatgttaatttaaaaagtatca 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttattgatgtcacaaatatagtacaagaaagaataaaaaatgttaatttaaaaagtatca 549
Query: 817 cagtatcaggtcatttatacactgagtccaacgcagagtgtgtgtgtggttgccatgcaa 876
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 550 cagtatcaggtcatttatacactgagtccaacacagagtgtgtgtgtggttgccatgcaa 609
Query: 877 gactgaaagtagcatcacaaatagcctctgaaatgaggcataaaatttacgacgaattag 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gactgaaagtagcatcacaaatagcctctgaaatgaggcataaaatttacgacgaattag 669
Query: 937 gttttactacttgtgctgggatagcacacaataaactgttggctaagcttatatgtcctt 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gttttactacttgtgctgggatagcacacaataaactgttggctaagcttatatgtcctt 729
Query: 997 taaataagcctaatgatcaaacaacaatttaccccgagcatggcgtcagttttatgtcta 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 taaataagcctaatgatcaaacaacaatttaccccgagcatggcgtcagttttatgtcta 789
Query: 1057 c 1057
|
Sbjct: 790 c 790
Score = 246 bits (124), Expect = 2e-64
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 182 tccaatctaaaatatcaatattttggaatttatgaaagaaaaacaataatttgttaaata 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tccaatctaaaatatcaatattttggaatttatgaaagaaaaacaataatttgttaaata 70
Query: 242 tatttcgtacttatttatcacaaaacatataatattactttatgactaaaacatggacga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tatttcgtacttatttatcacaaaacatataatattactttatgactaaaacatggacga 130
Query: 302 cagg 305
||||
Sbjct: 131 cagg 134
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 357,568
Number of extensions: 6956
Number of successful extensions: 6956
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6956
Number of HSP's successfully gapped: 2
Length of query: 2710
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2693
Effective length of database: 8,119,229
Effective search space: 21865083697
Effective search space used: 21865083697
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)