BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07962 (UTR included)
(2011 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 1106 0.0
BF01049A2D11 194 4e-49
BF14_729_C1 194 4e-49
BF01040A1D07 74 1e-12
>BF14_729_C3
Length = 2041
Score = 1106 bits (558), Expect = 0.0
Identities = 593/606 (97%)
Strand = Plus / Plus
Query: 690 cagcatcgcaagaagcacctgaagccacccacagttgaacgacaacctgcgatactacca 749
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 cagcatcgcaagaaccacctgaagccacccacagttgaacgacaacctgcgatactacca 1001
Query: 750 tatgtgaagggagttactgacagaataggcaacatcttgaagaaggtttccattaaaact 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 tatgtgaagggagttactgacagaataggcaacatcttgaagaaggtttccattaaaact 1061
Query: 810 atttacaaaccacataagaaagtgagccaattcttgagaccaatcaagagtaacattcct 869
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1062 atttacaaaccacataagaaagtgagccaattcttgagaccaatcaaaagtaacattcct 1121
Query: 870 ttacaacaagcgggtgtatacaaactcgactgtgactgtgtcttgtcatacattggacag 929
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1122 ttacaacaagcgggtgtatacaaactcgactgtgactgtggcttgtcatacattggacag 1181
Query: 930 acgaagaggagcatcgggactagggttaaagaacacatctcagacatcaaaaacaggcgc 989
||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||
Sbjct: 1182 acgaagaggagcatcggtacaagagttaaggaacacatctcagacatcaaaaacaggcgc 1241
Query: 990 gcgtcgaagtcagcagtgtgtgaacacacaatggacaaaccaggccactacattcgtttt 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 gcgtcgaagtcagcagtgtgtgaacacacaatggacaaaccaggccactacattcgtttt 1301
Query: 1050 gataaacctcaaatcctcgctcgggaagacaagtatataccgagattaattcgcgaggct 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 gataaacctcaaatcctcgctcgggaagacaagtatataccgagattaattcgcgaggct 1361
Query: 1110 attgaaattaaaaaacatcccaatttcaatagagaagatggctggaatctttcaaacacc 1169
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1362 attgaaattaaaaaacatcccaatttcaatagagaagatggctggaatctatcaaacacc 1421
Query: 1170 tgggaccccgttcttaaaaatataaaatcccatgtccgtaaccacaccgcaggacctcaa 1229
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1422 tgggaccccgttcttaaaaatataaaatcccatgtccgaaaccacaccgcaggacctcaa 1481
Query: 1230 gacaccgtgagcgcattctgccggcatccagagcggtacgccagaaaattaagaaatcga 1289
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1482 gacaccgtgagcgcattctgccggcatccagagcggtacgccannnnattaagaaatcga 1541
Query: 1290 tggcgg 1295
||||||
Sbjct: 1542 tggcgg 1547
>BF01049A2D11
Length = 776
Score = 194 bits (98), Expect = 4e-49
Identities = 147/162 (90%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 912 ttgtcatacattggacagacgaagaggagcatcgggactagggttaaagaacacatctca 971
|||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||
Sbjct: 614 ttgtcatacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctca 673
Query: 972 gacatcaa-aaacaggcgcgcgtcgaagtcagcagtgtgtgaacacacaatggacaaacc 1030
|| |||| ||| ||| | | |||||||||||||| |||||||||||||||||||||||
Sbjct: 674 gaaatcatgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaacc 733
Query: 1031 aggccactacattcgttttgataaacctcaaatcctcgctcg 1072
||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 734 aggccactacattcggtttgataaaccacaaatcctcgctcg 775
>BF14_729_C1
Length = 981
Score = 194 bits (98), Expect = 4e-49
Identities = 132/142 (92%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 757 agggagttactgacagaataggcaacatcttgaagaaggtttccattaaaactatttaca 816
|||||||||||||||||||||||||||| ||||||||| ||||||| || |||||| |||
Sbjct: 142 agggagttactgacagaataggcaacattttgaagaagctttccatcaagactattcaca 83
Query: 817 aaccacataagaaagtgagccaattcttgagaccaatcaagagtaacattcctttacaac 876
|||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||
Sbjct: 82 aaccacataagaaagtgagccaattcttgagacctatcaagagtaacatt-cattggaac 24
Query: 877 aagcgggtgtatacaaactcga 898
||||||||||||||||||||||
Sbjct: 23 aagcgggtgtatacaaactcga 2
>BF01040A1D07
Length = 710
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 207 agatcatctccgcggatgaacgacctgactcgccagtataacgttccgctcgcttca 263
|||||||||||| || ||||| |||||| ||||||||||| ||||||||||||||||
Sbjct: 222 agatcatctccgtgggtgaacaacctgagtcgccagtatagcgttccgctcgcttca 278
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 314,985
Number of extensions: 18662
Number of successful extensions: 18662
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 18639
Number of HSP's successfully gapped: 6
Length of query: 2011
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1994
Effective length of database: 8,119,229
Effective search space: 16189742626
Effective search space used: 16189742626
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)