BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07972 (UTR included)
(1771 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3363_C1 722 0.0
>BF14_3363_C1
Length = 763
Score = 722 bits (364), Expect = 0.0
Identities = 370/373 (99%)
Strand = Plus / Plus
Query: 693 aggcctcgtaagaacggcgaatgtaacttagaagtggtggttaaagacggtgttgtgtca 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aggcctcgtaagaacggcgaatgtaacttagaagtggtggttaaagacggtgttgtgtca 432
Query: 753 actgagatcgcgcacagtgaagagatgtcgtatataaacaatgtaggccccggggatcct 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 actgagatcgcgcacagtgaagagatgtcgtatataaacaatgtaggccccggggatcct 492
Query: 813 cttcttgccaaacaaaaacatcatcatcgaaaagcttttgagtacatatcaaaagcgttg 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cttcttgccaaacaaaaacatcatcatcgaaaagcttttgagtacatatcaaaagcgttg 552
Query: 873 aagattgacgaagaaaatgagggacaaaaagaattagcaatagaactgtacaagaaaggt 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aagattgacgaagaaaatgagggacaaaaagaattagcaatagaactgtacaagaaaggt 612
Query: 933 atctatgaattggagcgagggattgcagtagactgctgggggggtcggggcgacgcctgg 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 atctatgaattggagcgagggattgcagtagactgctgggggggtcggggcgacgcctgg 672
Query: 993 cagagggcccaaaggctccatgataagatgaaaaccaatctaggcatggccaaggatcgt 1052
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cagnnngcccaaaggctccatgataagatgaaaaccaatctaggcatggccaaggatcgt 732
Query: 1053 ttacatttcctcg 1065
|||||||||||||
Sbjct: 733 ttacatttcctcg 745
Score = 607 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Plus
Query: 390 catgtactcaagctgtttttagattattttattagaataataaacgtgcgtgtctgcgtt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catgtactcaagctgtttttagattattttattagaataataaacgtgcgtgtctgcgtt 60
Query: 450 ataagtctatggctatttggtgttaaaccagtgggaactttattgttcttgatggtttcg 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataagtctatggctatttggtgttaaaccagtgggaactttattgttcttgatggtttcg 120
Query: 510 ggtgacgatttcaatggtggtcgtttatcgcgaaaaactactaggtccccaaaccgaaaa 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtgacgatttcaatggtggtcgtttatcgcgaaaaactactaggtccccaaaccgaaaa 180
Query: 570 tctaagaagaccgatgcagacatagcaaagggatcagcgttgcgaaatgattcgcaacct 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctaagaagaccgatgcagacatagcaaagggatcagcgttgcgaaatgattcgcaacct 240
Query: 630 tctgtccacaagaggaacctttatgtagtctccttcccaatcattattctctttaatttg 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctgtccacaagaggaacctttatgtagtctccttcccaatcattattctctttaatttg 300
Query: 690 ttgagg 695
||||||
Sbjct: 301 ttgagg 306
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,984
Number of extensions: 19524
Number of successful extensions: 19524
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19524
Number of HSP's successfully gapped: 2
Length of query: 1771
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1754
Effective length of database: 8,119,229
Effective search space: 14241127666
Effective search space used: 14241127666
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)