BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07987 (UTR included)
(2329 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059B1H11 747 0.0
>BF01059B1H11
Length = 417
Score = 747 bits (377), Expect = 0.0
Identities = 380/381 (99%)
Strand = Plus / Plus
Query: 1538 gcctggacgctggcatgacgttgtcctgccgcctccctcccgccccaccgctctagcaca 1597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gcctggacgctggcatgacgttgtcctgccgcctccctcccgccccaccgctctagcaca 72
Query: 1598 ccacgtcacccacgaactagttggacttcagcctggagctgtctacgaagcgatcgtaca 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ccacgtcacccacgaactagttggacttcagcctggagctgtctacgaagcgatcgtaca 132
Query: 1658 agcgaaaaacagatacggctggaacgaggtcagcgacatattccagttccacactctcgg 1717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 agcgaaaaacagatacggctggaacgaggtcagcgacatattccagttccacactctcgg 192
Query: 1718 cggatctcactccgttcacgcggacgaactgtcacctatgttctcttccgcggccataca 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cggatctcactccgttcacgcggacgaactgtcacctatgttctcttccgcggccataca 252
Query: 1778 ccgactgatgacgtcagcggtcgcgttagctttatataccctgctcggatgatccgccat 1837
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ccgactgatgacgtcagcgctcgcgttagctttatataccctgctcggatgatccgccat 312
Query: 1838 tttgttttctgtcaagtaataccgaatttaagtgtaagcatttttttttatctagcattt 1897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tttgttttctgtcaagtaataccgaatttaagtgtaagcatttttttttatctagcattt 372
Query: 1898 aattagatctagactaattaa 1918
|||||||||||||||||||||
Sbjct: 373 aattagatctagactaattaa 393
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 327,718
Number of extensions: 21604
Number of successful extensions: 21604
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 21604
Number of HSP's successfully gapped: 1
Length of query: 2329
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2312
Effective length of database: 8,119,229
Effective search space: 18771657448
Effective search space used: 18771657448
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)