BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08001 (UTR included)
(4435 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1504_C1 2906 0.0
BF01056A1B08 88 1e-16
BF01012A1B09 88 1e-16
BF01025B2E05 86 6e-16
BF01012A1E04 86 6e-16
BF01052B1F12 74 2e-12
BF14_729_C2 70 3e-11
>BF14_1504_C1
Length = 1486
Score = 2906 bits (1466), Expect = 0.0
Identities = 1481/1486 (99%)
Strand = Plus / Plus
Query: 2253 aatgatttgaaaattaaacccgaagagatgtcgattgaagtttgggattatattttcttc 2312
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatgactttaaaattaaacccgaagagatgtcgattgaagtttgggattatattttcttc 60
Query: 2313 aaagacgctcccatacctaagaacacgaaaatatctaaaaataaattagatctgatgaag 2372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaagacgctcccatacctaagaacacgaaaatatctaaaaataaattagatctgatgaag 120
Query: 2373 aagtctttccaattctggtacccagtagacctcagagtgtccggaaaggatctcattcag 2432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagtctttccaattctggtacccagtagacctcagagtgtccggaaaggatctcattcag 180
Query: 2433 aatcatctgacgttctatatttacaatcactgtgcaatgtgggagaaagaagaagacaaa 2492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatcatctgacgttctatatttacaatcactgtgcaatgtgggagaaagaagaagacaaa 240
Query: 2493 tggccaaaagggatccgagcaaatggtcacctcatgttaaattcagcaaaaatgtccaaa 2552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggccaaaagggatccgagcaaatggtcacctcatgttaaattcagcaaaaatgtccaaa 300
Query: 2553 tctgacggaaacttcttaacactatctgagagtatcgacaaattcagtgccgatggaatg 2612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctgacggaaacttcttaacactatctgagagtatcgacaaattcagtgccgatggaatg 360
Query: 2613 agactgactctagctgacgccggagactccgttgaagatgctaactttgttgaaagtaca 2672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agactgactctagctgacgccggagactccgttgaagatgctaactttgttgaaagtaca 420
Query: 2673 gccgatgccgctattttaagactttacacttttattgaatgggtgaaggaggtcatggtc 2732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccgatgccgctattttaagactttacacttttattgaatgggtgaaggaggtcatggtc 480
Query: 2733 actaaatcaaacttcaggacaggagagtacaatttccatgataaagtttttgtcagtgaa 2792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 actaaatcaaacttcaggacaggagagtacaatttccatgataaagtttttgtcagtgaa 540
Query: 2793 atgaacacaaaaattattcagactgatgataactacaacaaactgctgttcaaggaggcc 2852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgaacacaaaaattattcagactgatgataactacaacaaactgctgttcaaggaggcc 600
Query: 2853 ttgaaaactggtttctttgagcttcaggctgccagagataaatatagggagttgtgttcc 2912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgaaaactggtttctttgagcttcaggctgccagagataaatatagggagttgtgttcc 660
Query: 2913 gagggaggcatgcacgagagccttataacacagtacattagcacccaggcgaaactcatt 2972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gagggaggcatgcacgagagccttataacacagtacattagcacccaggcgaaactcatt 720
Query: 2973 tcaccaatatgcccgcatgtcgctgaacatgtttgggaactacttggtaataaaggtagc 3032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcaccaatatgcccgcatgtcgctgaacatgtttgggaactacttggtaataaaggtagc 780
Query: 3033 attcttcatgaaagatggccagttgctggagaagtggatgagatagcagtgaaagcgagc 3092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 attcttcatgaaagatggccagttgctggagaagtggatgagatagcagtgaaagcgagc 840
Query: 3093 aactatctcatggaagcggctcactccttccgagtttatctcaaaaatcattgtgctgtc 3152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aactatctcatggaagcggctcactccttccgagtttatctcaaaaatcattgtgctgtc 900
Query: 3153 aaaaaaccaaagaaaggagaagtcgtcaaacaggagtctaaaccgaacaaagctgttata 3212
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 901 aaaaaaccaaagaaaggagaagtcgtcaaacaggagcctaaaccgaacaaagctgttata 960
Query: 3213 tgggtggccaaggaatatcctaaatggcaacatattattttgagcacacttaaagaaatg 3272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tgggtggccaaggaatatcctaaatggcaacatattattttgagcacacttaaagaaatg 1020
Query: 3273 catggaccaaatggtcttcccgataacaaaacaatatccagcaagttagcagaaataaat 3332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 catggaccaaatggtcttcccgataacaaaacaatatccagcaagttagcagaaataaat 1080
Query: 3333 gatctgaaaaagtatatgaagagggttatgccgtttgttcaggcgaccagagagaacata 3392
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 1081 gatctgaaaaagtatatgaagagggttatgccgttcgttcaggcaaccagagagaacata 1140
Query: 3393 gagcgtattggccttgaagctctccgcgtgggattggcgtttgatgaagcggctgtacta 3452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gagcgtattggccttgaagctctccgcgtgggattggcgtttgatgaagcggctgtacta 1200
Query: 3453 caggataatgcacagtatttaagagataccctcgatctagagtacatagaaattaaattg 3512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 caggataatgcacagtatttaagagataccctcgatctagagtacatagaaattaaattg 1260
Query: 3513 gtagatgaggacgctccagaacggactcgtactgaatgcgctcccgggtcacctcacgcc 3572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gtagatgaggacgctccagaacggactcgtactgaatgcgctcccgggtcacctcacgcc 1320
Query: 3573 agcttcttcacacatgtgaccccggcggcggacgtcgtgttactgaaccccgaccagcgc 3632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 agcttcttcacacatgtgaccccggcggcggacgtcgtgttactgaaccccgaccagcgc 1380
Query: 3633 tcgggtctgttcacagttagcctgaagttaggggagggggaaacacttgattcccttaag 3692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 tcgggtctgttcacagttagcctgaagttaggggagggggaaacacttgattcccttaag 1440
Query: 3693 gagaagttggcgaaacaagtcaaggggatacgagatatggatgcgc 3738
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gagaagttggcgaaacaagtcaaggggatacgagatatggatgcgc 1486
>BF01056A1B08
Length = 761
Score = 87.7 bits (44), Expect = 1e-16
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 4108 atgagatctaatactttcgcgagttttattcatttcaatgaaactaatatat 4159
||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 96 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatatat 147
>BF01012A1B09
Length = 841
Score = 87.7 bits (44), Expect = 1e-16
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 4108 atgagatctaatactttcgcgagttttattcatttcaatgaaactaatatatatcggata 4167
||||||||||| ||| ||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 705 atgagatctaagactgtcgcgagttttattcatttaaatgaaactaatatatttcggata 764
>BF01025B2E05
Length = 759
Score = 85.7 bits (43), Expect = 6e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 4105 ttaatgagatctaatactttcgcgagttttattcatttcaatgaaactaatatat 4159
|||||||||||||| ||||||||||||||||||||||| |||||||||| |||||
Sbjct: 122 ttaatgagatctaagactttcgcgagttttattcatttaaatgaaactagtatat 68
>BF01012A1E04
Length = 841
Score = 85.7 bits (43), Expect = 6e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 4109 tgagatctaatactttcgcgagttttattcatttcaatgaaactaatatat 4159
|||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 618 tgagatctaagactttcgcgagttttattcatttaaatgaaactaatatat 568
>BF01052B1F12
Length = 785
Score = 73.8 bits (37), Expect = 2e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 4108 atgagatctaatactttcgcgagttttattcatttcaatgaaactaatatatatcggata 4167
|||| |||||| | ||||||||||||||||||||| |||||||||||||| | |||||||
Sbjct: 297 atgaaatctaagaatttcgcgagttttattcatttaaatgaaactaatatttttcggata 356
Query: 4168 t 4168
|
Sbjct: 357 t 357
>BF14_729_C2
Length = 1289
Score = 69.9 bits (35), Expect = 3e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 4103 atttaatgagatctaatactttcgcgagttttattcatttcaatgaaacta 4153
|||||||||||||||| |||||||| ||||||| |||||| ||||||||||
Sbjct: 679 atttaatgagatctaagactttcgccagttttaatcatttaaatgaaacta 629
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 489,262
Number of extensions: 8726
Number of successful extensions: 8726
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 8726
Number of HSP's successfully gapped: 7
Length of query: 4435
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4417
Effective length of database: 8,109,745
Effective search space: 35820743665
Effective search space used: 35820743665
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)