BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08011 (UTR included)
(1441 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 123 8e-28
BF14_335_C4 109 1e-23
BF01043B1E03 105 2e-22
BF01060B1D11 100 1e-20
BF01047B2H03 82 3e-15
BF01037A2H12 80 1e-14
BF01016B1E06 76 2e-13
BF14_335_C5 70 1e-11
>BF14_335_C2
Length = 1827
Score = 123 bits (62), Expect = 8e-28
Identities = 136/160 (85%), Gaps = 3/160 (1%)
Strand = Plus / Minus
Query: 813 ggtataacagccaaatccctcaacaacctgctaaaagatttgggcctgccaagaactaat 872
||||||||||| ||||| ||| ||| ||| |||||| | ||||||||| | ||||||||
Sbjct: 1103 ggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaactaac 1044
Query: 873 atcagttcattcttggaacttgcgtcgaaggcagccctagtaggttcgtttcaaatttgg 932
| |||||||||||| |||| | | |||||| |||| ||||||||||||||||||||||||
Sbjct: 1043 accagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaatttgg 984
Query: 933 ttaggttgagagaggaggttgaacagtagaggtgagcgtt 972
|||| |||||||||| ||| || || ||||||||||||
Sbjct: 983 ttag---gagagaggagcttggacggtggaggtgagcgtt 947
>BF14_335_C4
Length = 1491
Score = 109 bits (55), Expect = 1e-23
Identities = 91/103 (88%)
Strand = Plus / Plus
Query: 880 cattcttggaacttgcgtcgaaggcagccctagtaggttcgtttcaaatttggttaggtt 939
|||||||||||| || ||| ||||||||||||| ||| ||| |||| ||||||||||||
Sbjct: 1135 cattcttggaacgtgagtctaaggcagccctagcaggatcgattcatatttggttaggta 1194
Query: 940 gagagaggaggttgaacagtagaggtgagcgtttaatgcgcgt 982
|||||||||| ||| | ||| ||||||||||||||||||||||
Sbjct: 1195 gagagaggagcttggaaagttgaggtgagcgtttaatgcgcgt 1237
>BF01043B1E03
Length = 830
Score = 105 bits (53), Expect = 2e-22
Identities = 166/203 (81%), Gaps = 3/203 (1%)
Strand = Plus / Plus
Query: 804 ggagtgagtggtataacagccaaatccctcaacaacctgctaaaagatttgggcctgcca 863
|||||| | ||||||||||| ||| ||| ||||||| || ||| | ||| |||||||
Sbjct: 206 ggagtgcgaggtataacagcttcatctctctacaacctactgaaacacttgagcctgccc 265
Query: 864 agaactaatatcagttcattcttggaacttgcgtcgaaggcagccctagtaggttcgttt 923
|||||||| |||| ||||||||||||| | | | ||||||| || |||||| ||||
Sbjct: 266 agaactaacatcaaatcattcttggaacgtactgcaaaggcaggcc---taggtttgttt 322
Query: 924 caaatttggttaggttgagagaggaggttgaacagtagaggtgagcgtttaatgcgcgtt 983
||||||||||||||| ||||||||| ||| ||||| ||||||||| |||| |||||||
Sbjct: 323 caaatttggttaggtagagagaggaccttggacagtggaggtgagcacttaacgcgcgtt 382
Query: 984 agaaaggagcccgttaaacctat 1006
||| ||| |||| ||||||||||
Sbjct: 383 agataggggccctttaaacctat 405
>BF01060B1D11
Length = 799
Score = 99.6 bits (50), Expect = 1e-20
Identities = 96/111 (86%), Gaps = 4/111 (3%)
Strand = Plus / Minus
Query: 571 tcccagatcagagtaatttagtaaga----tggggcaaaggtaccgaaaaaacttgctac 626
|||||||||||||||||||||||||| |||| |||| ||||||||||||||||||
Sbjct: 234 tcccagatcagagtaatttagtaagacgggaggggtaaagataccgaaaaaacttgctat 175
Query: 627 atctgcggggaggcagttggaacggctaagcacttgctggtgggatgtagg 677
|| |||| | |||||||||||| |||||||| |||||| |||||||||||
Sbjct: 174 atttgcgagaaggcagttggaattgctaagcatttgctgatgggatgtagg 124
>BF01047B2H03
Length = 758
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 617 aacttgctacatctgcggggaggcagttggaacggctaagcacttgctggtgggatgtag 676
||||||||| ||||||| |||||||||||||| ||| |||| |||||| ||||||||||
Sbjct: 365 aacttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtag 306
Query: 677 ggtgctcctggatagcg 693
| | |||||||||||||
Sbjct: 305 gctactcctggatagcg 289
Score = 75.8 bits (38), Expect = 2e-13
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 340 agagtagggttaggatgaagttggaagtccaaagatacggatatattaaaatcctttatt 399
|||||||| ||||||| ||| |||| || |||||||||||||||| || || ||||||
Sbjct: 582 agagtaggattaggatcaaggaagaaggcccaagatacggatatattgaagtcttttatt 523
Query: 400 cggcaagactagaattctaaatacaagatccatgtaatgagcttagaaatgcagaatgag 459
||||||||| ||||| | ||| || ||||||| |||||| ||||| |||||||| |||
Sbjct: 522 cggcaagacgagaatgatggatataacatccatgcaatgagtttagatatgcagaacgag 463
Query: 460 tg 461
||
Sbjct: 462 tg 461
>BF01037A2H12
Length = 773
Score = 79.8 bits (40), Expect = 1e-14
Identities = 89/104 (85%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 783 aatttgtactcggtagcagtaggagtgagtggtataacagccaaatccctcaacaacctg 842
||||||||| |||| |||||||| ||| ||||||| ||||||||| ||| ||||||||
Sbjct: 671 aatttgtacgaggtaaaagtaggagcgagaggtataaaagccaaatctctcgacaacctg 730
Query: 843 ctaaaagatttgggcctgccaagaactaatatcagttcattctt 886
|||||||| || | | |||||||| |||| ||||||||||||||
Sbjct: 731 ctaaaagactt-gccttgccaagagctaacatcagttcattctt 773
>BF01016B1E06
Length = 606
Score = 75.8 bits (38), Expect = 2e-13
Identities = 75/85 (88%), Gaps = 3/85 (3%)
Strand = Plus / Minus
Query: 921 tttcaaatttggttaggttgagagaggaggttgaacagtagaggtgagcgtttaatgcgc 980
|||||||||||||||||| |||||||||| ||| || || ||||||||||||||| |||
Sbjct: 323 tttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaa--cgc 266
Query: 981 gttagaaaggagcccgttaaaccta 1005
|||||| ||| |||| |||||||||
Sbjct: 265 gttagatagg-gccccttaaaccta 242
>BF14_335_C5
Length = 1597
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 935 aggttgagagaggaggttgaacagtagaggtgagcgtttaatgcgcgttagaaaggagcc 994
|||| |||||||||| ||| || || |||||||||||||||||||||||||| ||| ||
Sbjct: 1438 aggtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcg 1497
Query: 995 cgttaaaccta 1005
| |||||||||
Sbjct: 1498 ccttaaaccta 1508
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 195,791
Number of extensions: 4661
Number of successful extensions: 4661
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 4659
Number of HSP's successfully gapped: 9
Length of query: 1441
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1424
Effective length of database: 8,119,229
Effective search space: 11561782096
Effective search space used: 11561782096
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)