BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08045 (UTR included)
(2083 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3009_C1 1463 0.0
>BF14_3009_C1
Length = 856
Score = 1463 bits (738), Expect = 0.0
Identities = 747/750 (99%)
Strand = Plus / Plus
Query: 487 gtttaagtgggaaaatggtcgctcagaagagaggtcgtggtgccaaaaatcaagcgaaca 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gtttaagtgggaaaatggtcgctcagaagagaggtcgtggtgccaaaaatcaagcgaaca 166
Query: 547 aagctaaagccaatcagccaactgaagaagtcgttgcgacggaagtgaccgaacaagaac 606
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aagctaaagccaatcagcccactgaagaagtcgttgcgacggaagtgaccgaacaagaac 226
Query: 607 ctgaagctgccgaagaaaacaatggagattcacagcccgagaataatgaagaacaagcga 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ctgaagctgccgaagaaaacaatggagattcacagcccgagaataatgaagaacaagcga 286
Query: 667 caggggaggaagctgcggaggaacagtcagaaacagaacagacccaagaagatgaaccca 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 caggggaggaagctgcggaggaacagtcagaaacagaacagacccaagaagatgaaccca 346
Query: 727 aagctgaagaactcaaagaagataaagtagaatctgggaaactactggtggagaatctgc 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aagctgaagaactcaaagaagataaagtagaatctgggaaactactggtggagaatctgc 406
Query: 787 cttcaagctatctattcgactatcaagacaaactcaaggagctgttcagtaagcatggag 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 cttcaagctatctattcgactatcaagacaaactcaaggagctgttcagtaagcatggag 466
Query: 847 aagtcgtcagtgtgaaacgtggtccaatcattgtaaccgaactgaccacaactccaacat 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aagtcgtcagtgtgaaacgtggtccaatcattgtaaccgaactgaccacaactccaacat 526
Query: 907 tatcggctatagttgaattcaaaaacaaagattccctggaaaaggcgctgtcagagaacg 966
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tatcggctatagtcgaattcaaaaacaaagattccctggaaaaggcgctgtcagagaacg 586
Query: 967 gcacgtccttggatggtagcgtaatctctgtggtggtggaatcccgagcggacaccggca 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gcacgtccttggatggtagcgtaatctctgtggtggtggaatcccgagcggacaccggca 646
Query: 1027 tcctggtgggagtcccttacgaggccagctgcgactacgtgaaggcgctgttcgaacagt 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tcctggtgggagtcccttacgaggccagctgcgactacgtgaaggcgctgttcgaacagt 706
Query: 1087 gcggcccggtcgcgcacgtacatgagttcagcaagaccaagtacaagatattacgagtaa 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gcggcccggtcgcgcacgtacatgagttcagcaagaccaagtacaagatattacgagtaa 766
Query: 1147 ccttcaatgagaaggagtcagtggagcgtgctctgaagttggacagagacctccgcatca 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 ccttcaatgagaaggagtcagtggagcgtgctctgaagttggacagagacctccgcatca 826
Query: 1207 acgggttcctggttacagtatccaagtaca 1236
||||||||||||||||||| ||||||||||
Sbjct: 827 acgggttcctggttacagtctccaagtaca 856
Score = 145 bits (73), Expect = 3e-34
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 1 aactcgtaaagtgaattagcgtctttttgtgtgaatattaagtttttattgaaaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 aactcgtaaagtgaattagcgtctttttgtgtgaatattaagtttttattgaaaaaagtg 90
Query: 61 ttaatattatagtaacg 77
|| ||||||||||||||
Sbjct: 91 ttgatattatagtaacg 107
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 208,276
Number of extensions: 3683
Number of successful extensions: 3683
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3683
Number of HSP's successfully gapped: 2
Length of query: 2083
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2066
Effective length of database: 8,119,229
Effective search space: 16774327114
Effective search space used: 16774327114
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)